Carya illinoinensis (pecan): 122275945
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Entry
122275945 CDS
T08745
Name
(RefSeq) cullin-4-like
KO
K10609
cullin 4
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03420
Nucleotide excision repair
cill04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122275945
09124 Replication and repair
03420 Nucleotide excision repair
122275945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122275945
03400 DNA repair and recombination proteins [BR:
cill03400
]
122275945
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cill04147
]
122275945
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
122275945
DNA repair and recombination proteins [BR:
cill03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
122275945
TCR (transcription coupled repair) factors
Cul4-CSA complex
122275945
Exosome [BR:
cill04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122275945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
122275945
NCBI-ProteinID:
XP_042941228
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Position
9:complement(14904860..14924778)
Genome browser
AA seq
827 aa
AA seq
DB search
MSLPNKRSATTTNDATTIHTPTSSPPSSHFPPMKKAKSQAVAFDPRNGLHHHQDLSAATT
ANNSNNVVVFDPSSMVLDDDLKPDDSSAPARSVAANLARKKSQPPQPAKKLVIKLVKAKP
TLPANFEELTWAKLKSAISAIFLKQPDPIDSEILYQAVNDLCLHKLGGNLYQRIEKECEL
HISSALQSLVGQSPDLVVFLSLVERCWQDLCDQMLLIRGIALYLDRTYVKQTPNVRSLWD
MGLQLFRKHLSSSPEVEHKTVTGLLRMIEKERLGEAVDRTLLNHLLKMFTALGIYLESFE
KPFLECTSEFYAAEGMKYMQQSDVPDYLKHVEARLHEEHDRCLLYLDASTRKPLIATAEK
QLLERHISAILDKGFMMLMNGNRIEDLRRMYSLFSRVNALESLRQALSSYIRRTGQGVVM
DEEKDKDMVASLLEFKALLDTIWEESFSKNESFCNTIKEAFEHLINLRQNRPAELIAKFL
DEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEK
SMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGY
WPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGYCVLKAEFPKGKKELAVS
LFQTVVLMLFNDAENLSFQDIKDSTGIEDKELRRTLQSLACGKVRVLQKFPKGRDVEDDD
TFVFNEGFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSH
TLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccccaacaaacgctcagccacaaccaccaacgacgccaccactatccacact
cccacctcctctcctccgtcttctcacttccccccaatgaaaaaagccaagtcccaagcc
gtcgccttcgaccccagaaacggccttcaccaccaccaagacttatccgccgccaccacc
gccaataacagcaacaacgtcgtcgttttcgatccctcttctatggtccttgacgacgat
ctcaagcccgacgactcctccgcccccgctcgctccgttgccgccaatttggccaggaaa
aagtcccagccgcctcaacccgccaagaagctcgtcatcaagctcgtcaaagctaaacca
acgctccctgcaaattttgaagagcttacatgggcaaagctcaagtcagctatatctgct
atatttctaaagcaaccagatcctattgactcagagatactttatcaggctgttaatgat
ctttgtctgcacaaattggggggaaatctttatcaacgcattgaaaaggagtgtgaattg
cacatatcttcagcattgcaatccttggttggccaaagccctgatttggtggtattttta
tcacttgttgagagatgctggcaggatctttgtgaccaaatgttattaattcgtggtata
gctttgtatctagatagaacatatgtgaagcaaacacctaatgtacgatcactgtgggac
atgggattgcaacttttccgcaaacatctttcatcgtctccagaagttgagcacaaaact
gtcactggccttttaagaatgatagaaaaggaaagattaggtgaagcagtggataggact
ctccttaatcaccttctgaagatgtttactgccctaggaatttacttggaaagctttgag
aagccattccttgaatgcacatctgagttttatgctgctgaaggcatgaagtacatgcag
caatccgatgttccagattatttgaagcatgtggaggcaaggttgcatgaggaacatgac
agatgtttactctacctggatgcaagtacaagaaagccactaatagcaactgcagaaaag
caactacttgaacgccatatatctgcgattcttgataaggggttcatgatgctaatgaat
gggaaccgcattgaggacctccggaggatgtattcgctgttttcaagggtcaatgcactt
gagtctctaaggcaagcccttagctcatacatccgcagaactggacagggtgttgtcatg
gatgaagagaaagacaaggatatggttgcatcccttttagaatttaaggctttgcttgac
acaatatgggaggaaagcttttccaagaatgaatcgttttgcaataccattaaggaagca
tttgagcatctcatcaatcttcgtcagaaccgacctgctgagcttattgcaaagtttctg
gatgagaagcttcgtgctgggaataagggtacttctgaagaggaattggagggtactcta
gataaagttttggttttattcaggttcatccagggtaaggatgtgtttgaagcattctac
aagaaagatcttgcgaaaaggctgcttttggggaagagtgcttccatcgatgcagagaag
tccatgatctctaagctgaagactgagtgtgggagccaatttacaaacaaacttgaagga
atgttcaaagacatcgaattatcaaaagagataaatgaatctttcaaacaatcatcccag
gccaggacgaaactcccgtcagggattgagatgagtgtgcatgttttaactacagggtac
tggccaacttatcctcccatggatgttagacttcctcatgaattgaatgtctaccaggac
atttttaaggaattctacctgagcaagtacagcgggaggcgcttaatgtggcaaaattca
ttaggttactgtgtgttaaaagctgagtttcctaaaggcaaaaaggagttggctgtttca
ctatttcagactgttgttttgatgctctttaatgatgccgagaacctaagttttcaagat
attaaggactccactgggattgaggataaggaactgaggaggactttgcagtcccttgca
tgtggaaaagttcgagtcctacaaaagtttcccaagggtagagatgtggaagatgacgat
acatttgtgttcaatgaaggatttacagctcctctttaccgaataaaggtaaatgcaatc
cagatgaaggagacagtggaggagaacacaagcacgactgaaagagtattccaggatcgt
cagtatcaggttgatgctgctattgttcgaataatgaagactaggaaagtactgagtcac
acgcttctgataactgaactcttccaacagctcaagtttccaattaagcctgctgatttg
aagaaaaggattgaaagcctcatcgacagagagtatctggagcgggacaagaacaaccca
cagatatacaactacttggcgtga
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