Carya illinoinensis (pecan): 122276156
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Entry
122276156 CDS
T08745
Name
(RefSeq) serine/threonine-protein kinase ATG1c isoform X1
KO
K08269
serine/threonine-protein kinase ULK2 [EC:
2.7.11.1
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122276156
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cill01001
]
122276156
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122276156
03029 Mitochondrial biogenesis [BR:
cill03029
]
122276156
Enzymes [BR:
cill01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
122276156
Protein kinases [BR:
cill01001
]
Serine/threonine kinases: Other
ULK family [OT]
122276156
Membrane trafficking [BR:
cill04131
]
Autophagy
Autophagosome formation proteins
Atg1 complex
122276156
Mitochondrial biogenesis [BR:
cill03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
122276156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
MIT_ATG1
PK_Tyr_Ser-Thr
APH
ATG1-like_MIT2
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
122276156
NCBI-ProteinID:
XP_042941614
LinkDB
All DBs
Position
9:39817554..39833875
Genome browser
AA seq
809 aa
AA seq
DB search
MAQATGRVRFVGEYQVGRQIGSGSFSVVWHARHRVHGTEVAIKEIATGRLNKKLQESLMS
EIFILKRINHPNIIRLHDIIEVPGKIHLVLEYCRGGDLSIYIQRQGRVPEATAKQFMQQL
VAGLQILRENSLIHRDLKPQNLLLSTSDNNSVLKIADFGFARSLQPRGLAETLCGSPLYM
APEIMQLQKYDAKADLWSVGAILFQLVTGKTPFTGNNQIQLLQNIMKSNELQFPPDIDLS
SDCKDLCQKLLRRNPVERLTFEEFFNHPYLSQRQPAASLGSRRSSRVVDEFPVCDFDPVR
NMEENFQEYCLPFLLDDDSSGPEGSPSLRRRSSLKSTHGFSPDTKFGRREVASPPNNVNL
TSGYGSATDNLESTSSRLDSRRPSNRITEPLPFFLNDDSSGPEGSPSSLRRRSSVKSTYG
FSLDTKVGRREAVSANSNNDVNLTSGFGSVTDNMESTSSRLDSRRPSNRITDPLTSTDLR
SPNARSRAVVDSLELSDQDYVIVSGPPMDVSSSSACASKPGHSIYKSGNSPQASIRTNTT
VSAPMPIIGTTTSNIDRIGSLESQSSAPGTSQGSMEIGDALEQPSTHCTTRIKSLQHCAS
AIKELLNEKIEADRQLEAFSIQFVLLAIWKQALHICHTQAASAMEGSPSQETLRYRSTSK
KYGSPDTEVHLDVCSTQLLEDISPQIEKAFLLEVEHAEGLAKAIEPGNTEMPDAMETIFE
SALAFGRRGGVEELMGNMETAAALYSKAVRLLVFLLVEAPSLILNPPFSLTNSDRYRLRT
YIDIINNRQGYSRSQRMAILKCDDQHCPT
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggctactggtagggttaggttcgtcggggagtaccaggtgggccggcaaatc
gggtctgggtccttctctgtggtttggcacgcgaggcaccgggtacatggaaccgaggtg
gcgatcaaggagatagctacgggccggctcaacaagaaattacaagagagtctcatgtct
gagattttcatcctcaagcggattaaccacccgaatattattcgcctccacgatattatt
gaggttcctgggaagatacaccttgtacttgagtactgcagagggggtgatctttccatt
tacatacaacgccagggaagagtcccagaagccactgcaaagcaattcatgcagcaacta
gtggctggtctacaaattctacgtgaaaatagtcttatacatcgggatttaaagccacag
aatctcctcctctccactagtgacaataattcagttttgaagattgcagattttggattt
gcaagatctttgcaacctagaggccttgcagaaacattgtgtggttctccactttacatg
gcaccagagataatgcaacttcaaaagtatgatgcaaaggcagatctctggagtgttggt
gcgatcttatttcaacttgttactggaaaaactccatttactggaaacaatcaaatacag
ttgctccagaacattatgaaatcaaatgaattacaattccctccagatatagatttgagt
tctgactgcaaagatttgtgccagaaattgctccgccgtaatccagttgaaagattaaca
tttgaagagttttttaaccacccgtatctttctcagagacaaccagctgcatcactgggg
agtaggaggtcttcaagagtagtggacgaattccctgtgtgtgactttgatcccgtgaga
aatatggaggaaaattttcaagagtattgtctgcctttcttgctagatgatgattctagc
ggtcctgaagggagcccatccctaaggaggaggtcttcactgaagtctactcatggattt
tctcctgatacgaaatttggtagaagggaagtagcatctccccctaacaatgtgaatctg
acttccggatatggtagtgccacagataatttggaaagtactagttctaggttggatagc
cgtagaccctcaaacagaataactgaacctctgcctttctttctaaatgatgattctagt
ggtcctgaagggagcccatcctccttaaggaggaggtcttcagtgaagtctacttatgga
ttttctcttgatacaaaagttggtagaagggaagcagtatctgccaattctaataatgat
gtgaatctgacttcgggatttggtagtgtgacagataatatggaatctactagttctagg
ttggatagccgtagaccctcaaacagaataactgatcctctgacatccacagacctgaga
tctccgaacgctcgatcaagagcagtcgtggattcactagagttaagcgatcaagattat
gttattgtatctggacctccaatggacgtgtcatcttcctcagcttgtgcttccaagcca
ggccattctatatacaagtcagggaattctccccaagcatctattagaacgaacaccacg
gtaagtgccccaatgccaatcattggcacaacgactagtaacattgatcgaattggaagc
ttggaaagtcagagctctgctccagggacctcacaaggatcaatggaaataggagatgct
ttagagcagccatcaactcactgcacaacgaggattaagtcattacagcattgtgcatct
gccattaaagaattattgaatgaaaagattgaggcagataggcaattagaggcattctcc
attcagtttgtacttcttgcaatttggaagcaagccttgcatatatgccatacacaagct
gcctcagctatggaaggaagtccaagccaagaaactctgagatataggagcaccagtaag
aagtatggtagtcctgatacagaagtacatcttgatgtttgcagcactcaattgctggag
gatatctcccctcagattgagaaagcgtttctgctggaagttgaacatgctgaaggactt
gctaaggccattgaacctggtaatacagagatgccagatgcaatggaaacaatatttgaa
tctgctcttgcttttgggaggcgtggaggcgttgaggagctcatgggcaatatggaaact
gcggcagcattgtactcaaaagctgtgcgtttgttagtctttcttctagtggaagcaccg
tccctcattctcaatcctccgttctccctcacaaactcagaccggtataggctccgaact
tatattgatatcattaataacaggcaaggttactcaaggtcccagcggatggctatactg
aagtgcgacgatcaacactgccccacttag
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