Carya illinoinensis (pecan): 122276173
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Entry
122276173 CDS
T08745
Name
(RefSeq) long chain base biosynthesis protein 1 isoform X1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00600
Sphingolipid metabolism
cill01100
Metabolic pathways
Module
cill_M00094
Ceramide biosynthesis
cill_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
122276173
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cill01007
]
122276173
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
122276173
Amino acid related enzymes [BR:
cill01007
]
Aminotransferase (transaminase)
Class II
122276173
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
OKR_DC_1
Cys_Met_Meta_PP
Aminotran_5
YdfZ
Motif
Other DBs
NCBI-GeneID:
122276173
NCBI-ProteinID:
XP_042941659
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All DBs
Position
9:7219669..7227399
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AA seq
481 aa
AA seq
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MASAVLKIVNTTLDWVTLALDAPSARAVVFGVHIGGHLFVEVLLLVVILFLLSLKSYKPP
KRPLTKKEIDELCDEWVPESLIPPLTEEMQREPPMLESAAGPHAIINGKEVVNFASANYL
GLIGHEKLLESCSSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLS
TVFSAIPAFCKRGDIIVVDEGVHWGIQNGLHLSRSTIVYFKHNDMESLRSTLEKITAENK
RAKKLRRYIVVEAVYQNSGQIAPLDEIIRLKEKYRFRVLLDESNSFGALGSSGRGLTEYY
GVPIEKIDIVTAAMGHALATEGGFCTGSARVIDHQRLSSSAYVFSASLPPYLASAAITAI
DVLEENPDLIKKLKENIARLWKGLSDIPGLSIASNAESPIVFLKLEKSTGSIKNDLTLLE
EIADRVLKEDSVFVVASKRSTLDKCRLAVGIRLFVSAGHSESDLQKASGSLKRVAAQVLK
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgctgttctgaaaatagtgaatactactttagattgggtgactttggcttta
gatgctccttctgcgcgagctgttgtttttggagtacatatcggcgggcatctatttgtg
gaagttcttcttttggttgtcatccttttcctgctttccctgaaaagttacaagcccccg
aaaaggcctttaaccaagaaggaaatagatgagctatgtgatgaatgggtcccagaatcc
ctcattcctcctcttacagaagagatgcagagggaacctccaatgttagaaagtgctgca
gggccgcatgcaataatcaatggcaaagaagttgtcaattttgcttcagcaaattatctt
ggattgataggacatgagaaattgcttgagtcatgttcctctgcattggagaaatacggt
gttggttcttgtggtcctcgtggattctatggaacaattgatgtacaccttgactgtgag
gccagaatagcaaaatttttgggaactcctgattcaattctctattcctatggactgtcc
accgtgttcagtgcaattccagctttttgcaaaaggggagatatcattgtagtggatgaa
ggagtccactggggaatacaaaatggccttcatctctctagaagcacaattgtgtatttc
aagcacaatgatatggaatctctaaggagtactcttgagaaaatcactgcagagaataag
cgggctaagaaattgcggcgctacattgttgttgaagctgtgtaccagaattctggccaa
atagctcccttagatgagatcattagattgaaggagaaatatcgcttccgcgttttattg
gatgagagcaactcatttggtgcacttggcagttctggaaggggtctcaccgagtactat
ggggttccgattgagaagatagatattgtcactgctgccatgggacatgcattagccaca
gaaggaggattttgcaccggaagtgctagagtcattgatcatcaacgattgagcagttct
gcatatgttttttctgcttctttgcccccatatcttgcgagtgcagcaataactgccatt
gatgtcctggaggaaaatcctgatctgataaagaaactgaaggaaaacattgcccgttta
tggaaaggattgtcagatataccaggcctctcaatagcaagtaatgcagaatcgcccatt
gtttttctcaagctagagaagtcaacaggttccattaaaaatgacctaactcttctcgaa
gagattgccgatcgtgtgttgaaggaagattcagtatttgtggtggcttccaaaagatcg
acgcttgataaatgtcgtttagctgtgggaatcagattgtttgtttctgctggccattca
gaatccgatctgcagaaggcatctggatcattgaaaagagttgcagcacaggtgctgaag
agttaa
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