KEGG   Carya illinoinensis (pecan): 122276221
Entry
122276221         CDS       T08745                                 
Name
(RefSeq) replication protein A 14 kDa subunit B-like
  KO
K10740  replication factor A3
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03030  DNA replication
cill03420  Nucleotide excision repair
cill03430  Mismatch repair
cill03440  Homologous recombination
cill03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122276221
   03420 Nucleotide excision repair
    122276221
   03430 Mismatch repair
    122276221
   03440 Homologous recombination
    122276221
   03460 Fanconi anemia pathway
    122276221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cill03032]
    122276221
   03400 DNA repair and recombination proteins [BR:cill03400]
    122276221
DNA replication proteins [BR:cill03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    122276221
DNA repair and recombination proteins [BR:cill03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     122276221
   MMR (mismatch excision repair)
     122276221
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     122276221
SSDB
Motif
Pfam: Rep_fac-A_3
Other DBs
NCBI-GeneID: 122276221
NCBI-ProteinID: XP_042941719
LinkDB
Position
9:complement(1619302..1622393)
AA seq 106 aa
MDTSNPAVFVNAELLRLYVGRRVRAVIQVLQSDGGVVMGKSTDENQIVVKGSPPAPLSKF
VEIVGIADSEKSIRAEVWSNFGDSFDTYTYNQLCQLANGEFKHLFL
NT seq 321 nt   +upstreamnt  +downstreamnt
atggatacctcaaaccctgcagtttttgttaacgcagagctgctgcgattgtatgttggt
cgtagggtgcgggcagtgatacaggttttgcaatctgatggtggagttgttatggggaaa
tctactgatgagaatcagatagttgtcaaaggctctccgcctgcccccctctcaaaattt
gttgagattgttggtatcgctgacagtgaaaaatccatccgtgcggaagtatggagcaac
tttggtgactcatttgacacgtatacatacaatcagctgtgtcagcttgcaaatggggaa
tttaaacacttgttcctctga

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