Carya illinoinensis (pecan): 122276305
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Entry
122276305 CDS
T08745
Name
(RefSeq) LIMR family protein At5g01460-like
KO
K14617
LMBR1 domain-containing protein 1
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
122276305
04980 Cobalamin transport and metabolism
122276305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122276305
Membrane trafficking [BR:
cill04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
122276305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
TMEM237
DUF7801
Uso1_p115_C
Motif
Other DBs
NCBI-GeneID:
122276305
NCBI-ProteinID:
XP_042941852
LinkDB
All DBs
Position
9:complement(41644391..41652807)
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AA seq
508 aa
AA seq
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MGDFNLALVIVAIVVCILVFIFNVYLLVNYQHPDDANQAYFPKFVVVLGLSVAAISILML
PADVANRQACRHAIYNGACNLTLPMKDLWLAIYILDAVLVFFVIPFAMFYYEGDQEKSVG
KRIKSALLWVGTTAIVCGLVLGILYGLIGKVDFTVMHLSSSTTSFPTTWDFSSSQQCIGG
THQCSAYTASASSEKTWTMRTTFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFIK
RPKAVITRSQYIKEATELGKKARELKKAADSLQQEERSGSKGRKWRKNVKAVEKELLQLE
EDVKLLEEMYPQGEKAETSWALTVLGYLAKLVLGILGLIVSVAWVAHIVIYLLINPPLSA
FLNEVFIKLDDIWGLLGTAAFAFFCFYLLLAVIAGAMMLGLRLVFITIHPMKWGATLMNS
FLFNVGLILLCSISVIQFCSTAFAYYAQATAAQEIFGHTLESLRGIRYLYKYNVFQIAFV
ALAGLTFVYYAAFGWRRRKPSGRFQLST
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatttcaatctcgctcttgtgatcgtcgccatagtcgtgtgcatcctcgtcttc
atcttcaatgtctacctcctcgtcaattaccagcaccctgacgatgccaaccaggcctat
ttccccaaattcgtcgtcgtattgggtctttccgtcgccgccatttctatactgatgcta
ccggccgacgtggctaaccggcaggcgtgtaggcacgcgatatacaatggcgcgtgtaat
ctaaccctgccaatgaaggatttgtggctcgctatctatattctcgacgccgtgctcgta
ttctttgttatccccttcgccatgttctactacgaaggggaccaagaaaagagtgttggt
aagaggatcaaaagcgcgctgctgtgggtggggacgacggctattgtgtgtggtctggtg
cttggcattttatacggactgattggaaaggtggacttcactgttatgcacctttcttct
tccacaacttccttccctaccacgtgggacttctctagtagtcaacagtgtattggaggc
acacaccagtgctctgcgtatactgcaagtgcttcttcggagaaaacttggactatgcgc
actacctttccagaatatgttgtcgcccttgctaccattgttggatctgtgctttttgct
atatttggtggtgttggtattgcttgtctgccgttgggacttatattttcattcatcaag
cgcccaaaggctgttatcactcgctcgcagtatatcaaggaagccactgaactaggtaaa
aaagcgagagaattgaagaaagcagctgactccctccagcaagaagaaagaagtggttct
aagggccgaaagtggcgtaaaaatgtcaaggcagtagaaaaggagttgcttcagttggaa
gaagatgtgaagctccttgaagagatgtatcctcaaggagaaaaggctgagacttcttgg
gctttgactgtgcttgggtacttggctaaacttgtgctgggaattttagggttgattgtt
tcagtggcatgggttgcacatattgtcatatatctgttgattaaccctcctctttctgct
tttctgaatgaggttttcatcaagctggacgatatctggggtcttctgggtactgcagca
tttgcattcttctgcttttaccttctccttgccgttattgcgggggcaatgatgcttggt
ctgagattagttttcattacgattcaccccatgaagtggggagccacacttatgaactcg
tttctgtttaatgttggtcttattcttctttgctccatcagtgtgattcagttctgctcc
actgcatttgcatactatgctcaagcaactgcagcacaagaaatctttggccacacgctg
gaatcacttcgtggaattagatatttgtacaaatacaatgtcttccaaattgcatttgtt
gctcttgcgggattgacctttgtgtattatgctgcctttggatggagaagaaggaaaccc
agtggcaggttccaactttctacttaa
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