Carya illinoinensis (pecan): 122276347
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Entry
122276347 CDS
T08745
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 1 isoform X1
KO
K14807
ATP-dependent RNA helicase DDX51/DBP6 [EC:
5.6.2.7
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cill03009
]
122276347
Enzymes [BR:
cill01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122276347
Ribosome biogenesis [BR:
cill03009
]
Eukaryotic type
Pre-60S particles
Helicases
122276347
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
122276347
NCBI-ProteinID:
XP_042941924
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All DBs
Position
9:14331959..14346457
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AA seq
515 aa
AA seq
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MEEQKLRSVPVLPWMRSPVDFSLFEECPLDLLPFLDSRLKVPLHNMGISSLFPVQVAVWQ
ETIGPGDFERDLCINSPTGSGKTLAYALPIVQKLSTRAVKCLRALVVLPTRDLAIQVKEV
FAAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDFSLELQSSVDILVATP
GRLMDHINSTKGFTLEHLCYLVVDETDRLLREAYQSWLPTVLRLTRSSDESFYPCASNYL
PPAFNSLKTIRRFGVERGFKGKPSPRLMKMVLSATLTQDPSKLAQLDLHHPLFLTTGKRR
YQLPEKLESYKLVCESKLKPMYLVALLQNIGEEKSIVFTSSVESTHRLCTLLNFFGDLQI
KIKEYSGLQRQSVRSKTLKAFREGEIQVLVSSDAMTRGMDVEGVRNVINYDIPAYIKTYV
HRAGRTARAGQSGRCFTLLREDEVRRLKKMLQKADNKCCPAYSIPSSSIESLHVIYTSAL
EKLKETVELETSRKRKIGFKSSRERKGNKTNHSKE
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcaaaagctgagaagcgtgcctgtgctgccatggatgcgtagtcccgttgat
tttagtctctttgaggagtgcccactcgatctccttcctttcctcgattccaggttgaag
gtgcctctccataatatgggcatatcttccctcttcccagtgcaagttgctgtttggcaa
gagacaattgggccaggcgattttgaacgagacctctgcataaattctccaactggaagt
gggaaaactttagcttatgctttgccaatagtgcaaaagctatcgactcgggctgttaaa
tgtctacgtgctttggtggtgttgcctacccgtgacttagcaattcaggttaaagaggtt
tttgctgcaattgcaccagccgtgggcttgtctgttggtttggcagttggtcaatcttct
atagctgatgagatttctgagcttatcaagaggcctaagcttgaggcaggcatctgttat
gaccccgaagatttttcgcttgagctacaaagttctgtggatatattggtggcaacccct
ggaaggctaatggaccatattaactccactaagggctttacccttgagcatctgtgttat
cttgtggttgatgaaactgaccgattactcagggaagcataccaatcctggctacctacc
gtacttcgattgactcgatctagtgatgaaagtttctacccttgtgcttcgaattatctt
cctcctgcattcaattccttaaaaaccataaggagatttggtgttgagagggggtttaag
ggtaaaccttccccccggctcatgaagatggtgctatctgcaacattgacccaagatcca
agcaagcttgctcagctagatctgcatcaccctttatttttgacaactgggaaaaggcgt
tatcagctcccagaaaagttagaatcctacaaattggtttgtgaatcaaaactcaaaccg
atgtatttggttgcccttctacaaaatataggagaagagaagtccattgttttcacatca
tctgtagaatcaactcatcgtctatgcaccttactaaatttttttggtgatctacaaatt
aagatcaaggagtattcgggtcttcaacgtcaatctgtaagaagcaagacattgaaggca
ttccgggaaggggagatacaagtgcttgtttcctctgatgcaatgacacgtggaatggat
gttgaaggtgttagaaatgttattaattatgacattccggcatacataaagacatatgtt
catcgggctggtcgaactgcaagagcaggccagagtgggcgttgcttcacattgctgcgt
gaggatgaggttaggcgtttgaagaagatgttacaaaaagctgacaataaatgttgtcct
gcttactctattccttccagttcaattgagtcgcttcacgtaatttacacatctgcactg
gagaaactaaaggagacggttgaattagaaacatcaaggaagcgcaagattggtttcaag
tcttctagagaacgcaaaggaaacaaaacaaaccattcaaaggaataa
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