Carya illinoinensis (pecan): 122276387
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Entry
122276387 CDS
T08745
Name
(RefSeq) sorting nexin 1 isoform X1
KO
K17917
sorting nexin-1/2
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122276387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122276387
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cill04990
]
122276387
Membrane trafficking [BR:
cill04131
]
Endocytosis
Macropinocytosis
Sorting nexins
122276387
Domain-containing proteins not elsewhere classified [BR:
cill04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
122276387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
BAR_3_WASP_bdg
Motif
Other DBs
NCBI-GeneID:
122276387
NCBI-ProteinID:
XP_042941987
LinkDB
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Position
9:complement(1706620..1716464)
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AA seq
402 aa
AA seq
DB search
MIATQRSVSGSSQSPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNLPEYQGPEK
IVIRRYSDFVWLRDRLFEKYKGIFIPPLPEKSAVEKFRFSAEFIEMRRQALDIFVNRIAS
HHELQQSEDLRTFLQADEETMERLRSQETGIFKKKPADLMQIFKDVQSKVSDVVLGKEKP
VEESNPEYEKLKHYIFELENHLAEAQKHAYRLVKRHRELGQSLSDFGKAVKLLGACEGNS
LGKAFSELGTKSETLSVKLQKEAHQLLMNFEEPLKDYVRAVQSIKATIAERANAFRRQCE
LAETTKLKEINLNKLTLMRSDKVGEAEIEYQELKAESEEATRMFEMIVRLMNEEIVRFQE
QKTLDMGIAFHEFAKGQARLANGIANAWRSLIPKLEACSSSS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgattgccacgcagaggagtgtatcggggtcttctcagagccctagatctccgtcttcg
caaccgtatctttccgtctcagtgactgatcctgtgaaattgggcaatggtgtccaagcc
tatatctcctaccgagttatcacgaagacaaatttacctgaataccaaggcccagagaag
attgttattcgacgttacagtgattttgtttggttacgtgatcgtctttttgagaagtac
aaaggcatttttatccctcctcttccagagaaaagtgctgtagagaagtttcgtttcagt
gctgagttcattgagatgaggcgtcaagctttggatatatttgttaatcgtatagcttcg
catcatgagcttcagcaaagtgaggatctgagaaccttcttgcaggcagatgaagagaca
atggagaggttaaggtcacaagagactggtatttttaagaaaaagccagctgatttgatg
caaatcttcaaggatgtacaatctaaagtgagcgatgttgttcttgggaaggaaaagcca
gtggaagagtcaaatcctgaatatgagaagctgaagcactacatttttgagcttgagaac
cacttagctgaagctcagaagcatgcatatcgtcttgtaaagaggcacagagagctgggg
caatctttgtcagactttgggaaggcagtgaaactccttggtgcttgtgaaggaaattct
ctagggaaggcattttctgagcttgggacaaaatcagagacgttatcagttaagctgcaa
aaggaggcgcaccagctcttgatgaactttgaagaacccttgaaagattacgttcgcgct
gtgcaatctattaaggcaactatagcagagagggccaatgcctttaggcgacaatgtgaa
ctggctgaaacaacaaagttgaaagagataaatcttaacaaactcacactaatgcgttct
gataaggtgggggaggcagagatcgagtatcaggagttgaaggcagaaagcgaggaagca
acgagaatgtttgagatgattgtacgactgatgaatgaagagattgtgcgctttcaggaa
caaaaaactttagatatggggattgcttttcacgaatttgcaaaaggacaggcacgtctg
gcaaatggtattgcaaatgcttggcgaagtcttattcctaagcttgaagcctgttcctcc
tcctcttga
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