Carya illinoinensis (pecan): 122276558
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Entry
122276558 CDS
T08745
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cill03016
]
122276558
Enzymes [BR:
cill01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
122276558
Transfer RNA biogenesis [BR:
cill03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
122276558
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GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
Motif
Other DBs
NCBI-GeneID:
122276558
NCBI-ProteinID:
XP_042942315
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Position
9:complement(38571704..38585512)
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AA seq
793 aa
AA seq
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MMAVRAVNSCSIFRSASSPPISAVRCRFFTFRSSSLRRHPKLGFQFPVLRPEQKFFGHGS
VWSCSVHSLVDIVMEELKFMRKRKRVCAASKVGLTSSGKLLEDKLVNRAMEKGLLLEFKK
DSDRVLLAVAQRPDGKKNWMVYDQNGVTSSIKPQQITYIVPGIENFDHAGISDFIRKAQD
NLDPALLEFAWVELLEKNKSVTTEELAEMIFGSAEPLESYCAHLLLSKDELYFCVLEAKG
SRSLYGPRPTVQVEELLQRKLAREAAEKELQEIVQLLKAAKAMPLEAKPPKSSWIVEDKI
RHIIESLESYAIDACKNDEQKKTAGVILKAMGLTKTASSAVNLLIDIGYFPVHVNLDLLK
FNIRTDHSDEIISAAESLLSESSDPDEIDRKDLTHLKVYAIDVDEADELDDALSAARLQD
GRLKVWIHVADPSKFVQPGSLVDREAMRRGTSIFLPTATYPMFPEKLAMEGMSLKQGEIC
NAVSVSVVLRSDGSIAEYSVENSSIKPTYMLTYESASELLHLNLEEEVELKILSEAAALR
LQWRLEQGAVDTGSLEARIKVANPEDPEPIINLYVENQADPAMRLVSEMMILCGEVIATY
GSCNNIPLPYRGQPQSNIDISAFAHLPEGPIRSSAIVKVMRAAEIDFRKPIRHGILGLPG
YVQFTSPIRRYMDLLAHYQVKAYLRGDSLPFSAGQLEGMASIINMHTRLAKRLFGSSLRY
WILEYLRRQAKERRYRALILRFIKDRIAALLLVEVGFQASASVSVGLHIGDEIEVWVEEA
HPRDDYLALKEVI
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggttcgagccgttaacagctgctccatctttcgctccgcttcgtctcctcct
atctccgctgtccggtgccgatttttcactttcaggagctcttcgttacgccgccacccc
aaattagggttccagtttcctgtactccggcccgagcaaaagtttttcggccatggcagt
gtttggagttgttcggttcacagtctcgtagacatcgtcatggaagagctaaagttcatg
cgcaaaaggaagagagtttgcgctgcctcaaaggttggcttaacgagcagtggaaagctt
cttgaagataagcttgtgaacagagcgatggagaaagggttgctgctggagttcaagaag
gattctgacagggtcttgctggcagttgcacagagacctgacggcaaaaagaattggatg
gtgtacgatcagaatggtgtcacatcctccattaaaccacaacaaattacgtatattgtt
ccaggcattgagaattttgatcacgcggggatttcagattttattcgtaaagcacaggat
aacttggatccggcacttctagagtttgcttgggttgagcttctagaaaaaaataaatca
gtgacaactgaagaattagcagagatgatttttggtagcgctgagccacttgaaagctat
tgtgcgcaccttttgctgtcaaaagatgaattatacttctgtgtacttgaggctaaaggt
tcacgttctctatatgggcctcgacctactgtgcaggtagaagaacttttacaaaggaaa
cttgcaagggaggctgctgagaaagaacttcaggagattgtacaattgctgaaagctgct
aaggcaatgcctttagaagctaaacctcccaaatcttcttggattgtcgaagataaaatc
agacacataattgaatctctcgaatcttatgccattgatgcctgcaaaaatgatgagcag
aagaaaacagctggggtgatacttaaggcaatgggattgacaaaaacagcatcatcggct
gtaaatctcctaatagatattggttatttccctgtacacgtcaatcttgatctcttaaag
ttcaacattcgtactgatcattcagatgagataatatcagcagcggaaagccttctgtcg
gagtcatctgatccagatgaaattgacagaaaagatctcactcacttgaaggtttatgcc
atcgatgttgatgaggctgatgagcttgatgatgccctgagtgcagcaaggttgcaagat
ggccggcttaaagtttggatacatgttgcagatccatctaaatttgtgcaacctgggagc
ttagtagaccgggaagcaatgagaagaggaacttctatattcttgccaaccgccacatat
ccaatgtttccggaaaaacttgctatggagggaatgagcttgaaacagggagaaatctgc
aatgcggtctctgtatctgttgtgctgcgttctgatggcagcattgcagaatactcggtg
gagaactcatctatcaaacccacctatatgctgacatacgagagtgcatctgaactgctt
catttgaacttggaagaggaggtagaactgaaaattctatctgaggcggcagctttgcgg
ttacagtggcggctagaacagggggcagttgacacaggctcattagaagcacgcatcaag
gtggctaaccctgaggatccagagcctattattaatctttatgttgaaaaccaagctgac
cctgcaatgcgactggtctctgagatgatgatactctgcggggaagttatagccacttat
ggttcttgcaataacattcctttaccctacagaggacagccccaatcaaacattgatata
tctgcatttgcacatcttccagaaggacctattaggagctctgccattgttaaagtaatg
cgtgctgctgaaattgatttcaggaagcctatacgccatgggattttgggacttcctggt
tatgttcagtttacatctcctattcgcagatatatggatcttcttgctcattatcaggtt
aaagcgtatcttagaggtgattctcttcctttctctgctggccagctagaagggatggca
tcgattataaacatgcatactagattagccaagaggctatttggcagcagtcttcggtat
tggatattagaatacctgaggaggcaagcaaaagaaagaagatatcgtgcattgatcctt
agattcattaaagatcggattgcagcactattgttagttgaggtgggatttcaagcttcc
gcatcggtgtctgtgggattacatattggagatgaaatagaagtttgggtggaagaagct
catcctcgtgatgattatcttgcacttaaggaggttatatga
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