Carya illinoinensis (pecan): 122276656
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Entry
122276656 CDS
T08745
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122276656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122276656
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122276656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
122276656
NCBI-ProteinID:
XP_042942465
LinkDB
All DBs
Position
9:complement(11683791..11688428)
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AA seq
472 aa
AA seq
DB search
MEMEPGKLFIGGISWDTNEDRLREYFQSFGVVVEAEIMKDRATGRARGFGFVVFADPVVA
ERVVMEKHVIDGRTVEAKKAVPRDDQNMLSRNNGSMHGSPGPAHTKKIFVGGLASTVTES
NFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLYKTFHELNGKLVEVKR
AVPKELSPGPSRGQMGGYNYGLSRVRSLLNGYAQGYNPSSVGGYGNRVDGRFSPVTAGRS
GSPSFSPGYGPGLNIEPGLSPSYGGNANLSSNLGFGRVLNPLYSGNSNRNVNPVGYGVGN
GRNSSVLSSASRNLLGNGSINYATNSANSTALLGLRNGSSGIASFGKIGALWSSSPNSGQ
GGGAGTTYSSDYLSYGSGEVNFGSGGMGYGRSSGTGVSLVSSYAASNSGYSGSYGLFYGD
PTWQSSPPEPEGSGSFGYGLGNAASDVLSKNSDDYVGLYSVTNRQSYKGIAV
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggagcctggaaagcttttcattggtgggatatcttgggacacaaatgaagac
cgtcttagagagtatttccagtcttttggagtagtagtggaagctgagataatgaaggat
cgagccacaggtcgtgcccgtggtttcggttttgttgtttttgcagaccctgttgttgca
gaaagagttgttatggaaaagcatgtgatagatggcagaactgttgaagcaaaaaaagct
gttcctagagatgatcagaacatgctgagcagaaacaatggcagcatgcatgggtctccc
ggtcctgcccatacaaagaagatatttgtaggaggattagcatccacagtcacggagagc
aattttaagaagtactttgatcaatttggtacaataacagatgtggtggtgatgtatgac
cataatacgcaacggccaagaggatttgggttcattacatatgattcagaggaagcagtg
gagaaagtgttgtacaaaacctttcatgaactcaatggcaaactggttgaagttaaaagg
gctgtccccaaagaactatctccagggccaagtcggggtcaaatgggtggatataactat
ggtctgagtagagttagaagtttacttaatggctacgctcaaggatacaatccaagctca
gtcgggggctatggaaatagagtggatggtagatttagtccagttactgctggtcgtagt
ggatctccttcattcagtcctggatatgggccaggattgaatattgaacccggattgagt
ccaagctatgggggaaatgcaaaccttagttctaaccttggttttggacgggtattgaac
cctttatatagtgggaattcaaataggaatgttaaccctgttggatatggtgtgggaaat
gggaggaatagttcagtcttaagttcagcaagccgtaatctgctggggaatgggagtatt
aattatgctactaactctgccaactccactgctctgctgggcctcagaaatggaagttca
ggaatagcttcttttggcaagattggagcactttggagttcctctcctaactcaggtcaa
gggggaggtgctggtaccacctacagcagtgactatcttagttatggcagtggagaagtc
aactttggttcaggagggatgggttatggaagaagcagtggaactggtgtttcactggtg
tcatcatatgctgcatcaaatagtggttacagtggatcctatggtttgttctatggggac
ccaacttggcaatcttcacctccagagccagaggggtctggctcatttggttatgggctt
ggaaatgcagcttctgatgttttaagtaaaaactctgatgattatgtgggtctttatagt
gttaccaatagacaatcatacaaaggaattgctgtgtag
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