Carya illinoinensis (pecan): 122276681
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Entry
122276681 CDS
T08745
Name
(RefSeq) E3 ubiquitin-protein ligase AIRP2-like isoform X1
KO
K25840
E3 ubiquitin-protein ligase AIRP2 [EC:
2.3.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122276681
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122276681
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122276681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4_2
zf-C3HC4
zf-RING_5
RING_XB3-XBAT31
zf-RING_UBOX
zf-rbx1
zf-RING_4
zf-RING_10
WG_beta_rep
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
122276681
NCBI-ProteinID:
XP_042942497
LinkDB
All DBs
Position
9:complement(41586021..41596774)
Genome browser
AA seq
242 aa
AA seq
DB search
MRKSFKDSLKALEADIQFANTLASDYPMEYDGTCLQMRLSYCPAAHFFLFLVQWTDCHLA
GALGLLRVLIYKVYEDGKTTMYIHERKATLKEFYGVIFPSLMQLQRGITDVEDRKQREIC
AAKYKRKDETDKGKLSEIDLEREEECGICMEMNGKVVLPICNHSMCMKCYRNWRVRSQSC
PFCRDSLKRVDTDDLWIYISNNEIVDLFTISRENVKRLFMYIDKLPVIVLEPRFDSYDPY
HR
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagtctttcaaggattcccttaaggccctcgaagctgatattcagtttgccaat
accctggcttctgattatccaatggaatacgatggcacatgccttcagatgagattatcc
tactgtcctgctgctcatttcttcctctttcttgttcagtggactgattgtcaccttgct
ggtgccttgggattgcttagagttctcatatacaaggtatatgaagatgggaagaccacc
atgtatattcatgagaggaaagccactctaaaagagttctatggtgtaatatttccctct
ttaatgcaacttcaaagaggaatcactgatgtggaagacaggaagcagagagaaatttgt
gctgccaaatacaagagaaaagatgagacggacaaaggaaagctctctgaaattgattta
gagagagaagaagaatgtggaatttgtatggagatgaacggcaaggttgtattgcctatt
tgcaaccattcgatgtgtatgaagtgctaccgaaattggcgtgtacgatctcagtcatgc
cccttttgccgggatagtctcaaaagagtcgacacagatgacctttggatctacatcagt
aacaatgaaattgtcgacttgttcactatctccagggagaacgtgaagagactttttatg
tacatcgacaagttgcctgtcattgttctggagcccagatttgattcatatgacccttat
caccgttaa
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