KEGG   Carya illinoinensis (pecan): 122276697
Entry
122276697         CDS       T08745                                 
Name
(RefSeq) uncharacterized protein LOC122276697
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122276697
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cill03041]
    122276697
Spliceosome [BR:cill03041]
 Complex A
  U2 snRNP components
   U2 related factors
    122276697
 Complex B
    122276697
SSDB
Motif
Pfam: RRM_1 RBD_DEAH11 RRM_9 E3_UbLigase_RBR
Other DBs
NCBI-GeneID: 122276697
NCBI-ProteinID: XP_042942529
LinkDB
Position
1:44466063..44480485
AA seq 927 aa
MSRSIRVKEKHEKSSAHSLHDRDEGSAARTRPFSFDEIMLRRENKKSSESLKEEAIKVGN
ISKEGIIENVSDQFESEKGTKYNRSSSPIVEKHVSEKSLKMSSRKKEENLSMKKDALFKG
KNRESHESDRKLKDKQNNDMNYKAKLGRNDRQHGRRKDEEWFASDAAIEVEKKHSRDLVT
RERHADRIKGESERGNKRRYRNGDDEKSRDRNTIKKHDLGKQRDLDVSERKESSKSHYEE
SRSKRRRSRSREHEDRSRRSISLSPRAHKHKSHHGGQRREFSSHSLKDRSRRQDSEIDKN
RVSINGSSSHYQRHGGYTSGLGGYSPRKRRIEAAVKTSSPSDHSPEKKSAGWDLPPVKTA
APFSPPVPSYFQSLNQAVASTVNDTANAFSVASTTTKSLSGVANTFATRTNASIDSVQLT
QATRPMRRLYVENIPSSASEKDVMECFNNLLMSSGVSRNHPCFNCTINKGQALVEFLTPE
DASAALSFDGNSFSGSILKIKRPKDFIEVATGDLEKSVATVDTISDRVKDSPNKIFIGGI
SKYISSKMLMEVVSVFGPLKAYHFEVNKELSEPCAFLEYVDQSVTHKACAGLNGMKLGGR
VLTVMQAMPGASLLENDGYSPSYGIPEHARSLLKQPTQVLKLKNVFDPEALSSLSDPDVE
EVLEDIRLECARFGTVKGVNVVKNGNGHTTTLDGCKVIEVRESAGALQDSLCNDRREETD
TSRKDVDHEPRQISEVDVPSGIKEIKEDVVKLNCFGDDKPADDIGEDTMNQKVQLDNNMV
AEDLGCKNIADGIPTELPIQLNGQVDQLDFHDENVGDIIQVKDISLDRKFKAVDHLTLED
TDSKLQEASAGLDSGLAMEAGAMERGGNEELDYDLGHVFEPWCVFVEYGRTEACCMAAHC
LHGRLFDNRVVAVEYIALDLYRSRFPK
NT seq 2784 nt   +upstreamnt  +downstreamnt
atgagcagatctattcgagtaaaagaaaagcatgaaaaaagtagtgcacattccctgcat
gatcgtgatgaaggaagtgctgcgcggacaaggcctttcagctttgacgagattatgctt
agaagggaaaacaaaaaatcgtctgaaagcttgaaagaggaggccatcaaagtgggaaac
atatcaaaggaaggaattattgagaatgtttctgatcaatttgaatctgaaaagggtaca
aaatacaatagaagctcttcccctattgtcgaaaagcacgtctcagagaaatcactgaaa
atgagttccagaaagaaagaagagaatctctccatgaagaaagatgctttatttaaggga
aagaacagagaaagtcatgagtcggatagaaagttaaaggataaacagaacaacgatatg
aattacaaagctaaactaggaagaaacgacagacaacatggtaggagaaaagatgaagag
tggtttgccagtgatgctgcaattgaggttgaaaagaagcattcaagagatttggtcact
agggagaggcatgcagatagaattaaaggagaatctgaaagaggaaacaagcgaagatac
agaaatggagatgacgagaaaagtagagacaggaatactataaagaaacatgaccttgga
aaacagcgtgatttagatgtttcagagaggaaggaatcatcaaaatcacattatgaggaa
tcaaggtcaaaaaggagacgttcaaggagtcgagaacatgaggaccgaagtagaaggtcc
atttcactatcacctagggcacacaagcataaatcccatcacggtgggcagcgcagagag
ttttcctcacattctcttaaagataggtctcgaagacaagattctgaaattgacaaaaat
agagtatcaattaatggttcaagtagccattatcagagacatggtggatacacaagtggc
cttggtggctattcaccaaggaagagaagaattgaggctgccgttaagacttcttccccg
tctgatcattcaccagagaaaaaaagtgccggttgggatctcccacctgtgaaaacagct
gcccctttttctcctccagttccgtcatattttcagtcattaaaccaggctgtggcctca
actgtaaatgacacagccaatgctttttctgttgcttcgactacaacgaagtctctttct
ggggtggcaaacacatttgcaacaaggacgaatgcctccatagactctgtccaactaact
caggctacccggcctatgagaaggctttatgttgaaaatataccatcttcagcctctgaa
aaagatgtaatggaatgcttcaataatttgttgatgtcttctggtgttagccgtaaccac
ccatgtttcaattgtactataaacaagggccaggctcttgttgaatttcttacacctgag
gatgcctctgcagccctttcttttgatggcaattccttctctggttccattctaaaaatc
aaacggcccaaagacttcattgaagtggcaactggtgatctggaaaaatcagtggctaca
gttgatacaatcagtgacagggtcaaggattcacctaacaagatattcattggtggaatt
tcaaagtatatttcatcaaaaatgcttatggaggttgttagtgtctttggacctttgaag
gcctaccactttgaggtcaataaagaactcagtgaaccatgtgcttttcttgagtatgta
gaccaatcagtgactcacaaagcttgtgccggtttgaatggtatgaagttgggagggcga
gtattaactgtaatgcaagctatgcctggtgcatcacttttggaaaatgatggatattct
ccaagctatgggatccctgagcatgcaaggtcacttctcaaacagcccacacaagtccta
aagcttaaaaatgtgttcgatcctgaggctttgtcatcactgtctgatccagatgtggaa
gaagttttggaagatattcggttggagtgtgcaagattcggcactgttaaaggtgttaat
gttgtcaagaacggcaatggtcacaccaccaccttagacggatgcaaagttatagaggtt
agggaatctgctggagccttgcaagattcattgtgcaatgacagaagagaagaaacagac
acctcaagaaaagatgttgaccatgagcccaggcaaattagtgaggtagatgttccgagt
ggtatcaaagaaattaaagaagatgttgtgaaattgaattgctttggtgatgataaacct
gctgatgatattggagaggacactatgaaccagaaggttcagctcgataataacatggta
gctgaagacctaggctgtaagaacatagcagatggcatccctacagaactccccatccag
ttgaacggtcaggttgatcaattggattttcatgatgaaaatgtcggtgatattattcaa
gtgaaagacattagtttggatagaaaattcaaggctgtagatcatttgactttggaagat
actgacagtaagttacaggaagcttctgctggattggatagtggcctggctatggaagca
ggtgctatggagaggggtggcaatgaggaactggattatgatcttggacatgtatttgag
ccatggtgtgtttttgtggagtacggaagaacagaagcctgttgcatggcagcgcattgt
ttacatggacggctttttgataaccgagttgtggcagtggagtacattgctcttgatctc
tacaggtcaagatttccaaagtga

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