Carya illinoinensis (pecan): 122276715
Help
Entry
122276715 CDS
T08745
Name
(RefSeq) protein NPGR2-like
KO
K21843
tetratricopeptide repeat protein 7
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122276715
Membrane trafficking [BR:
cill04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
122276715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_17
TPR_11
TPR_19
TPR_8
TPR_14
TPR_12
TPR_16
ARM_TT21
Vps39_1
TPR_CcmH_CycH
TTC7_N
E_motif
ARM_TT21_C
TPR_9
RNaseH_C
Motif
Other DBs
NCBI-GeneID:
122276715
NCBI-ProteinID:
XP_042942558
LinkDB
All DBs
Position
1:complement(44483943..44489736)
Genome browser
AA seq
731 aa
AA seq
DB search
MRTKYWMNKLVFSIRVRLRKMMKCICSGEQLKVDEIVHSSDSLATRDYSASGYSSRAGEI
ETRVDNSNIEEAESSLRESGYLNYEEARALLGRLEYQKGNTEAALHVFEGIDISAVTPKM
KVSISRRCEHNRRRSQSDAAPPMSMHAVSLLLEAVFLKAKALQSLGRFGEAAQSCKVILD
TVEFALPEGLPENFASDCKLQDTLTKAVELLPELWKLAGALQEAILSYRRALLYHWNLDM
ETSAKIQKEFAIFLLYSGCDANPPNLRSQMESSFVPRNNLEEAILLLLILLRNFVLKRIG
WDPSIIDHLSFALSVSGGFRALAHQAEELFPRIMDRKEQYRTLALCYYAEGEDMVALNLL
RNLLHNRENHDCILELLLASKLCGENLVCIEEGINYAYKALSELHGKCSQVASIANCLLG
VLLSAKSRVVTLDSERISKQSDALEALETAERTMRERDPYIVYHLCLEHAEQRKLDVALY
HAKRLLELEAGSSVDGYVLLARILSAQKRFIDAEAVINAALDQTGRWDQGELLRTRAKLQ
IAQGRLKNAIETYTHLLALLQVRTKSLGFGKNLLKNRRDRHRSLEMEIWHDLANVYTRLS
QWRDAEVCLSKSRAINPYSASRWHSTGLLYEAKGLHQEALKSFRKALDVEPTHAPSLISA
ACVLRELGGQSLPVVRSLLTDALRLDRTNPLAWYNLGLLYKADIRATELEAAECFEAAAL
LEESAPVEPFR
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgagaactaagtattggatgaataagctagtattcagcattcgagtaaggttgcggaag
atgatgaagtgtatttgttctggggagcaattaaaggtagatgaaatagttcattcgtcg
gactcactggcgacccgggactattcagcgagtggctattcatcccgagctggtgagata
gaaacgagggtggacaatagtaacattgaagaagcagagtcgtctcttcgtgagagtggt
tatctgaactatgaggaagcaagagctttattaggaaggcttgagtatcaaaaaggtaac
acagaagctgctcttcatgtatttgaaggaatagacatttctgctgtgacccccaagatg
aaagtttccatttctagaagatgcgaacacaatagacgccgttcacagagtgatgctgcc
ccgccaatgtctatgcatgctgttagtttacttcttgaagctgttttcctcaaagcaaaa
gcgttgcagagtcttgggaggtttggagaagctgctcaatcttgcaaagttattttggat
actgttgaatttgcattaccagaaggcttgcccgaaaactttgcatcagattgtaagtta
caagacacgctaacaaaggctgttgaattgcttccggagttatggaagcttgctggggct
ctccaagaagctattttatcgtaccggcgggccctcctttatcattggaatcttgacatg
gaaacctctgcaaagatacaaaaggaatttgccatctttcttctttatagtggttgtgat
gcaaaccctcccaatcttcgttcgcagatggaaagctcctttgtgccaagaaataactta
gaagaggctattcttctgttactgattctactaagaaattttgttcttaaaaggattgga
tgggacccatcaatcattgatcacctttcttttgctctctctgtttcggggggatttagg
gccctagcccatcaggctgaagaattgtttcctagaattatggatagaaaagaacaatat
cgcactctagctctctgctactatgcggaaggtgaggatatggttgctttgaatcttctg
aggaatcttttgcataatcgagagaaccatgattgcatattggaactattactggcttca
aaactttgtggagagaatttggtttgcattgaggaagggatcaattatgcttacaaagca
ctttcagaattgcatggaaaatgcagccaggtggcaagtattgcaaactgcttactgggt
gttttactgtctgctaaatccagagtggtcactttggattctgagagaatttccaagcag
tctgatgcacttgaggcactagaaactgctgagagaacgatgagagaaagagatccatac
attgtttatcatctttgcctagaacatgctgagcaaaggaagttggatgttgcactttat
catgcaaagcggctgttggaacttgaggctgggtctagtgttgacgggtatgtccttttg
gcacgaatattgtcagctcaaaaacgtttcattgatgcagaggctgtgattaatgctgct
ttggatcagactgggaggtgggaccaaggagaactgttgcgaactagagctaaacttcag
attgcacagggtcggttaaagaatgctatagagacatatactcatcttcttgctcttctt
caagttcgcactaaaagcttaggttttgggaagaatctcctaaagaataggagagaccgt
caccgaagtttggaaatggaaatatggcatgatttagctaatgtatatacaagattatca
cagtggcgggatgctgaggtttgcctttcaaaatctcgggctatcaatccttattctgct
tctagatggcattctacaggtttactctatgaagccaaaggtctccaccaagaagcgctg
aaatcatttcgaaaggcattagatgttgaacctacccatgccccaagcttgatatctgct
gcctgtgtcctccgagagcttggtggccaatcattgccggttgtgagaagccttctcact
gatgcacttcgacttgacagaacaaaccctttggcttggtacaatcttgggctgctctac
aaagctgacatcagggcaacagaactagaagctgctgaatgctttgaggctgcagctctt
cttgaagaatctgcacctgttgaacctttcagatga
DBGET
integrated database retrieval system
