Carya illinoinensis (pecan): 122277169
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Entry
122277169 CDS
T08745
Name
(RefSeq) F-box/LRR-repeat protein 3 isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122277169
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122277169
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
LRR_At1g61320_AtMIF1
LRR_8
LRR_14
F-box_5
LRR_RPS2
LRR_5
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
122277169
NCBI-ProteinID:
XP_042942998
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All DBs
Position
9:complement(42820547..42824801)
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AA seq
664 aa
AA seq
DB search
MKKQRFPQALNSYFDLLSEEIVLSILEFLGPNPLDKKSFSLVCKSFYAIEARHRRTLKPL
RSEHLPKVLKRYPHVTHMDLSLCRRVTDGSLAVVAGMCGSTLRSIDLSRSKFFTGAGLLS
LALRCENLVEMDLSNATELRDGSAAVVAEAKNLERLWMGRCKMVTDIGVGCIAVGCRKLR
LLNLKWCVGVGDLGVGLVAIKCKDIRVLDLSYLPITDKCLPSILNLQHLEDLTLEGCFGI
DDNNLAVLKHGCKSLKKLDMSSCQRITPVGLSSVFSCTRCLEQVTLAYGSSVNLDLADSL
NKLSMLQSIKLDGCSVTCDGLRAIGDWCVSLRDLSLSKCSGVTDYGLSYLVTKQRDLKKL
DITCCRKITDVSISHIANSCTALRSLRMESCILVPREAFVLIGRCHSIEELDLTDNEIDD
EGLKSISTCYKLSSLKLGICLNITDEGLSHVGMSCAGLKELDLYRCTGITDLGILAIAHG
CPGIEMINIAYCKEITDSSFFSFSKCSKLNTIESRGCHITSLGVAAIAAGCKQLTKLDIK
KCYEVDDVGMISLAYSSQNLKQINLSYSSVTDVGLLSLASISCLQSLTILHLKDLTARGL
AAALLACGGLTKVKLHASFKSMLPNQFFEHLEARGCAFYWRDKVFEAELDDPQCWKLRLE
DMVQ
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacaaaggtttcctcaggctctcaacagctacttcgatctcctttctgaggaa
atcgtgttgtctatccttgaattcctcggaccaaacccgcttgacaagaagtcgttttct
ttagtatgtaaatctttctatgccatcgaagccaggcaccgtcgaaccttgaagccgctc
cgttccgagcacctacccaaggtcctgaaaaggtacccgcacgtgacccacatggatctc
tctctgtgccggcgggtcaccgatggttcgctggctgtggtagctggcatgtgcgggagc
acactccgctccatcgatctctcccggtccaagttcttcacgggcgcggggctgttgagt
ctggcactgaggtgcgagaatctggtggagatggacctgtcgaacgcgaccgagctgagg
gacgggtcggcggcggttgtggcggaggcgaagaacctggagaggctgtggatggggagg
tgcaagatggtgaccgacataggggttggatgcatcgcggtgggatgtaggaagctgagg
ctattgaacttgaagtggtgcgtgggtgttggcgatttgggtgtcggcttggttgctatc
aagtgtaaagatattcgtgttttggatctttcttacttgccgatcaccgataaatgttta
ccatccattttaaatctgcaacatctcgaagatttgacattagaaggatgctttggtatt
gatgacaacaaccttgcagtccttaagcacgggtgcaagtcgctaaagaaacttgatatg
tcaagttgtcagaggattactcctgttggcttgtcttctgtattcagttgtactagatgt
ctagaacaagttactttagcatatggttcctctgttaatcttgatcttgctgatagtttg
aacaagctttccatgttgcaatcaatcaaattagacggttgctcagttacctgtgatgga
ctgagggccattggagattggtgtgtatcactgagggatctcagcttaagtaaatgttca
ggagtgacagattatggcctgtcctaccttgtaacaaaacagagagacttgaagaagcta
gacatcacatgttgtcgtaagataactgatgtatctatttcccacattgcaaattcttgc
acagctcttagatctctcaggatggaatcatgtatcctggttcctagagaagcatttgtc
ttaattggacgatgccattctattgaggaacttgacttaacagataatgaaatcgatgat
gaaggtttgaaatccatctccacttgctacaaactctccagcttaaaactcgggatttgt
ctaaacataactgatgagggactttcccatgttggcatgtcatgtgcaggacttaaggag
ctggatttgtacaggtgcacagggataactgatttagggattttagcaattgctcacgga
tgccctggcatcgagatgataaacatagcgtactgtaaagaaattaccgatagttccttc
ttttcattctcaaaatgctcaaaactaaacacaattgaaagtcgaggatgtcatatcaca
tcattaggggtagcagcaattgctgcaggatgcaagcaactaaccaagttagacataaag
aaatgttatgaagttgatgatgtggggatgatttcacttgcttactcctctcagaacctc
aagcagataaatttgtcgtatagctcagttacagatgtggggctcttgtctcttgccagc
atcagctgcctacagagcttgaccattttgcacttgaaagatttgacagccagggggctg
gcagccgccttattggcttgtggtggactgacaaaagtgaagctccatgcgtcctttaaa
tccatgttacccaatcagttttttgaacatttggaagctcgcggttgtgcattctactgg
agagataaagtgtttgaggctgaattagatgatccccagtgttggaaactaagattggaa
gatatggtgcaatag
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