Carya illinoinensis (pecan): 122277238
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Entry
122277238 CDS
T08745
Name
(RefSeq) zinc finger protein JACKDAW-like isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122277238
Transcription factors [BR:
cill03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122277238
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_4
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
122277238
NCBI-ProteinID:
XP_042943105
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Position
9:complement(34991910..34994914)
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AA seq
557 aa
AA seq
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MMSGDSFSLPSAIGAFAQEQTTNPNPKPDPNPAVKKKRNLPGTPVFLFFLTDPDAEVIAL
SPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRTNKEVRKKVYICPVKACV
HHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYKCDCGT
LFSRKDSFITHRAFCDALADESARLTSLSATNLNFRNDSLNETVIDPQRGLPHGLSVRGV
QDGPGLAHFVPGFRPDFNSMAIGSSLGMDHQKPRLSLWLNQANSQFNPNEMVANPHLYAS
SSNSTGFPEIVQVASAAANLFVSSSMANFGNFSQFQGTFDKSVPSSSNAALSLTAPPQEI
KEEGGNKGNLMETLSPLYSDSLNKQSKPACPLSATALLQKAAQMGSTRSNPSLFCSSFGV
MTSSSSSTTSFNTLNQNRNELHQVVQNAKQPENFTETGTVPMADGILGSSSNSISLTSPS
NSFEHLMMQSTSSGIQNGAIPLKNHRGSKGIDQNSLTRDFLGMRAGRESQRPFLAQELAK
FASLGSAMGLGQFTGNR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctggtgactctttttcattaccctctgcaatcggagcgtttgctcaagaacaa
accacaaaccctaaccctaaaccggatcctaatccagctgtcaagaagaagagaaatcta
ccaggaacacctgtttttcttttcttcttaacagatccagatgccgaggttattgctctt
tcaccgaagactcttatggcaacgaacagattcatctgcgaaatatgcaataaaggcttc
cagagggatcagaatctacaacttcaccgaaggggtcacaaccttccatggaagctccgg
caaaggaccaacaaagaggtccggaagaaagtttatatttgtccggtaaaggcctgcgtc
caccacgatccgtccagagctctcggggacctcaccggcataaagaaacattacagcagg
aaacatggcgaaaaaaaatggaagtgtgagaagtgttcaaagaagtacgcagttcaatca
gactggaaagctcattcgaagacctgtggaactagggagtacaagtgcgactgtggtacc
cttttttccaggaaggatagcttcatcacccacagagcattttgtgatgccttagctgat
gagagtgcaaggcttacttcactttctgctaccaatctgaatttcagaaatgattcactg
aatgagactgtgatagatcctcaacgaggtttgcctcatggattgtcggtccgtggagtt
caagatggtcctggactggcccactttgtcccggggtttcgaccagatttcaacagcatg
gccattggcagctctcttggcatggatcatcagaagcccagattatcactttggcttaac
caggcaaattctcagtttaatcctaatgaaatggtggctaatcctcatctatatgcatcc
tcaagtaattctactggttttcctgaaatagtgcaagtggcatcggccgcagccaatctc
tttgtctcatcttcgatggcaaatttcggaaacttcagtcagtttcaagggacgtttgac
aagagtgttccgagttcatcaaacgccgctctctctttaacagcaccacctcaagaaatt
aaagaggagggagggaacaaaggaaatttgatggaaaccctatccccactttactcagat
agcctaaacaaacaatcaaagcctgcttgccccttgtccgccactgcacttttgcagaag
gcagcgcagatgggttctacaagaagcaacccatcactcttttgcagcagctttggcgtt
atgacctcctcttcttccagcacaacgagcttcaatactctcaaccaaaacagaaatgag
ctgcaccaggtcgttcaaaatgcaaagcagccggagaattttacagaaactggcactgtg
ccaatggctgatggaatactgggcagtagttcaaattcgatatcgttaacaagtccatca
aacagttttgaacatctcatgatgcaaagtaccagtagtggaatacaaaatggggcaatt
ccattaaagaatcatcgaggctcaaaaggtattgatcaaaacagtctaactagagacttt
ctcggcatgagagcagggagggaatctcaacggcccttcttagcacaggagctagcaaag
tttgcttcattgggctcagctatgggtctgggccaattcactggcaaccgctga
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