Carya illinoinensis (pecan): 122277280
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Entry
122277280 CDS
T08745
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122277280
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122277280
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122277280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
zf-ANAPC11
Beta-prop_SPT8
zf-C3HC4
zf-rbx1
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
WD40_CDC20-Fz
DUF2884
PAXIP1_C
Beta-prop_EML_2
zf-RING_5
zf-Nse
Motif
Other DBs
NCBI-GeneID:
122277280
NCBI-ProteinID:
XP_042943160
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All DBs
Position
9:32024455..32077654
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AA seq
632 aa
AA seq
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MPDGDDDNADPEYIQILQNYEQYAQHGALDLEDQERAEEEEEEEEEEEDEEEEDEDHGED
EEYVPAVELHGVSRNGPIIHEALEYGVEEAGYKRRRTGGGEACSSTSQDNEWSRSEIDGL
FCPICMEAWTADGGHHICCLPCGHIYGMSCINKWLKQRKNSGKCPQCNRKCTLKDVTKLF
ASRVVAVDEESQKHIRSLEARCASLEKKGADWCKKEAEWKKREAELHVKVCQLSERKIYL
ENLLKDMQSRPSGAVKAGGNHQGRSVFGQNFGSAFCGQESSRSFILQKEFWLDGARLIDV
DASSEILLIVRRRSEMGATSVLTKMSLMPPHEKEDIFLPSNMKVIKDLCISPSNGSLVLF
ASLGQKLSVLSLESNNIILAYDLPAAAWSCSWDLQNSNYIYAGLQNGSLLVFDVRQTVRP
VNSLKGLTCNPVHTIHSLLHSSTHLPGVRSVLSASAIGLCHWNFGGAEEGPFLVPQTDNQ
GVCISLAYSPSSDDIVASYRPKVEMSNMAFTQPSLTPSQVIGQGIQGSHIFYNRVGSNCF
QKLGSASANVNDIRLPKKSVIIDMESQNRLFASGDEVTCELILQELPSFAVFQHLKIQKQ
HICDVKYTHALGQGLLSCLDEDRLQIFCMKLS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgccagacggcgacgacgacaatgctgaccctgaatatattcagattctccaaaactat
gagcaatacgcccaacacggggcattagacctcgaagaccaagaacgagccgaagaagaa
gaagaggaggaagaagaagaggaagatgaggaagaagaagatgaagaccacggggaagac
gaagaatacgttccggcggtagaattgcatggagtttcgcgcaacggtcccataattcac
gaggcattggaatatggggtcgaagaagcggggtacaagcggaggagaaccggaggagga
gaagcgtgttcgtcgacttcgcaggacaacgagtggagtcggagtgaaatcgacggccta
ttttgccctatttgcatggaggcttggaccgccgacggtggccatcatatctgttgtctt
ccttgtgggcacatatatggcatgtcttgcatcaacaaatggctgaaacaacgaaaaaac
tcaggcaagtgtcctcaatgcaataggaaatgcacattgaaggatgtaactaagcttttt
gcatcacgggttgttgctgttgatgaagaatcccaaaagcacattcggtcactcgaggct
aggtgtgcttctctcgagaagaagggtgctgattggtgtaagaaagaagctgaatggaaa
aaaagagaagccgagttgcatgtgaaggtttgccaactgtcagagaggaaaatatatttg
gagaatttattaaaagatatgcagagcaggccatctggagcagtaaaagctggtgggaat
caccaaggaagatctgtgtttggacaaaactttggctcagctttctgcgggcaagaatct
tctagaagtttcatattacagaaagagttctggctagatggtgcacgcttaattgatgta
gatgcttctagcgaaattctattaattgtgcgaaggcggtctgagatgggtgcaacctct
gtgcttacaaaaatgagcttgatgcctccacatgaaaaagaagatatttttcttccttca
aatatgaaagttattaaggacctatgcatttctccttctaatggtagccttgtacttttt
gcttcattagggcagaaattatctgttctcagtctggaaagcaacaacatcatcctagcc
tacgatctaccggctgctgcttggtcatgttcatgggatctccagaactcgaattatata
tatgctggactgcagaatggctcccttttggtgtttgatgtgcgccaaactgttcggcct
gttaattccctgaaggggctgacatgcaatcctgtgcataccattcattcacttttacac
agttcaactcatctgccaggtgttagatctgtcctatctgcttcggcaattggcctgtgt
cactggaactttggcggtgccgaagaagggccatttttggttcctcaaacggacaatcaa
ggagtttgtatatcccttgcttattctcccagcagcgatgacattgttgcttcgtatcgt
cccaaagttgagatgtcaaatatggcttttactcaaccttcgctaactccttcccaagtt
attggtcaaggaatacaaggctcccacattttctataaccgagtgggaagcaactgcttt
caaaagttgggttctgcatctgccaatgtaaatgacattcgactaccaaaaaaatctgtg
attatagatatggaaagccaaaaccggttgtttgcatctggggatgaagtaacatgtgag
ttgatcttgcaagagttgccatcgtttgcagtatttcagcatcttaaaatacaaaagcag
catatttgtgatgtgaaatacacacatgccctgggtcaaggtctactcagttgtttagac
gaggatagattgcaaattttctgcatgaagctctcatga
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