Carya illinoinensis (pecan): 122277376
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Entry
122277376 CDS
T08745
Name
(RefSeq) transcription initiation factor IIB-2-like
KO
K03124
transcription initiation factor TFIIB
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122277376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122277376
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
122277376
Prokaryotic type
Archaeal type
TFB
122277376
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
RB_B
WHD_GDS1
DUF7573
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
122277376
NCBI-ProteinID:
XP_042943275
LinkDB
All DBs
Position
9:4045175..4049970
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AA seq
311 aa
AA seq
DB search
MDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVGG
PTNPLLTDGGLSTVIAKPNGATGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLGL
VATIKDRANEIFKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKK
EIGRAKEYIVKQLGLENGQSVEMGTIHAGDFMRRFCSNLGMNNQVVKAAQEAVTKSEEFD
IRRSPISIAAAVIYIITQLSDNKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWYA
KEEDLKNLCSP
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgttttgttcagactgcaagcggcagacggaagtggttttcgatcactcggcc
ggggacacggtttgctccgagtgcgggctggttctggaatcacactccatcgatgagacc
tccgagtggcggactttcgccaatgaatcgggcgacaacgatcccgtccgtgtcggcggc
cccaccaaccccctattgaccgacggtggcctctccaccgtcatagccaagcccaacggt
gccacaggtgatttcctctcatcctcgctcgggcgatggcagaaccgcgggtccaacccg
gatcgggggctcatcctcgccttcaagaccatagctactatgtctgatagattgggcctt
gttgcaaccataaaggaccgggctaatgagatatttaagagggtggaagatcaaaagtct
agtagagggagaaaccaggatgcattattggctgcttgcctgtacattgcttgtcgacaa
gaagataagccacgcactgtaaaggaaatttgctctgtcgccaacggagccacaaagaag
gaaattggccgagcaaaagaatatatagtgaaacagctggggttggagaatggtcagtcg
gtggagatgggaacaatacatgctggggactttatgaggcgcttttgttccaatcttggt
atgaataatcaagtggtcaaagctgcccaagaagctgttacaaagtcagaagagtttgac
ataaggaggagtccaatatcaattgcagcagcagtcatttacattattactcagctttca
gacaataagaaacctcttaaagatatttcagtcgctactggagttgcagaagggacaatt
aggaattcctacaaggatctttatccccatgtatcgaagataatacctggctggtatgct
aaggaggaggatctcaagaacctctgcagcccttga
DBGET
integrated database retrieval system
