Carya illinoinensis (pecan): 122277377
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Entry
122277377 CDS
T08745
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cill01009
]
122277377
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122277377
Protein phosphatases and associated proteins [BR:
cill01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122277377
Membrane trafficking [BR:
cill04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
122277377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
122277377
NCBI-ProteinID:
XP_042943276
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All DBs
Position
9:complement(21280924..21314302)
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AA seq
1020 aa
AA seq
DB search
MDSQPSQSGRSPPIEESPTHASNVISSSLTKSNSDASSQSFSSILNNPHVGKSDWWWSSS
SSTNVAPPEFAPLISSSDVSRSDFQSYLALISESYHRFEDILNHANKENVDLENIGGQGE
ALVACLREVPALYFKEDFALEDGATFRAACPFSNVTENLVLQEKLSHYLDVVELHLVKEI
SLRSNSFFEAQGQLQDLNVKIVEGCSQILELKETIRLLDVDLVDSARQIQDLNATRNNLL
ALQQKLRLILYVNQALSALKLLVASADCAGALDITDDLQHLLDGDELTGLHCFRHLRDNV
AASIESINSILSAEFMRASIHDAGDSDVVILSQVKARASIPTNGKDDDQVKLDEEETTNF
QDRLLPIIIGLLRTAKLPSVLRIYRDTLTADMKTAIKTAVAELLPILLLRPLESDFTTGE
RTADSDGGGASLASKLRSLSSESFVQLLSAIFKIVRTHLVRAAEVKKAIEWIMSNIDGHY
AADSVAAAIALGAATAETQDSEGQRGSLLPFSPQRAAKVPSLQGKSNETISPSNMSRNFR
ADVLRENTEAVFAACDAAHGRWAKLLGVRALLHPKLRLQEFLSIYNITQEFITATEKIGG
RLGYSIRGTLQSQAKAFVEFQHESRMAKIKAVLDQETWVEVDVPDEFQAIVASFFGSEEL
VSENPHHAENNVETSSSEVIINNDGSLITDTGPLKSQQKIDQTKISGISIENLEEMKSIP
LAQGIEKNKADTTTYSAHNNNSKMEHGKSTSHTLMYKGVGYHMVNCGLILLKILSEYTDM
NNYLPALSSEIVHRVVEILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLALASQVIGFTY
ATIPDIRRILFLKVPETRKALLVSEIDRVAQDFKVHRDEIHTKLVQIMRERLLVHLRGLP
QIVESWNRPEDSDPQPSQFARALTKEVGFLQRVLSRTLHEVDVQVIFRQVVIIFHSQISE
AFSRLEIQSPQAKNRLYLDVKHILGCIRSLPSDDLSNSGTPNWGKLDEFLVERFGSEAGQ
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggattcgcagccttcccaatcgggaaggtccccgccaattgaagaatctcccacccat
gccagtaacgtcatctcctcctccttgacgaaatcgaattcagatgctagtagccagagc
ttttcatccatcctcaacaaccctcacgtgggcaaatcagattggtggtggtcctcatcc
tcctccaccaacgtcgcccctcccgagttcgcgcccttgatctcctcatccgacgtttca
cgatccgatttccagagctatttggctttgatttcggagtcctatcaccgattcgaggac
atcctaaaccacgcgaacaaagagaatgtggatttggagaacatcggcggccaaggcgaa
gctctcgtcgcgtgcctgcgagaagttccggccctgtacttcaaggaggatttcgcgttg
gaggacggggccacgttccgcgctgcgtgtccgttttcaaacgtgacggagaacttggtg
ctgcaggagaagctgtcgcactacctggacgtggtggagttgcacctagtgaaggagatc
tctctgcggtccaattccttctttgaggctcaggggcagctgcaggacttgaatgtgaag
atcgtggaaggttgtagtcagattttggagttgaaggagacgataaggctcttggatgtg
gatttggtggattccgccaggcagattcaggacttgaatgccacaaggaacaacttgttg
gctcttcagcagaaattaaggcttatattatacgtcaaccaggctctgtcggctcttaaa
ttgcttgttgcatctgcagattgtgctggagctttggacatcactgatgatttgcagcat
ttgctggatggggatgagcttacaggtttacactgctttcgtcacctacgagataatgta
gcagcttcaatagagtccataaacagcattctttcagcagaatttatgcgcgcttcaata
catgatgctggagattcagacgttgtaattttgtcccaagtgaaagcaagggcttccatt
ccgacaaatggaaaagatgatgatcaggttaagttggatgaagaagagaccactaatttt
caagatcgacttcttcccatcataattggattgctcagaactgcaaagctaccttctgtg
ttgaggatctaccgagacacgcttactgctgatatgaaaactgctattaagactgcagtt
gcagagctgcttcccatcctcctcctccggccattggagtcagatttcaccactggagaa
cgaacagctgattctgatggtggaggtgcatcgcttgccagcaagttgaggagcctatca
tctgaaagctttgttcaacttttgagtgctattttcaagattgtacggacacatttagtg
cgggctgctgaagtgaaaaaggccattgagtggatcatgtccaacattgatggtcactat
gctgccgattcagttgctgctgcaattgcgcttggtgctgcaactgcagaaacacaagac
agtgagggtcagcgtggttcgcttttaccattttcacctcagagagctgctaaggttcct
tcacttcagggaaaatcaaatgagaccataagtccctcaaatatgtcgagaaatttcagg
gctgatgtattgcgggagaacacagaagctgtttttgcagcttgtgatgctgctcatgga
agatgggcaaagctccttggtgtccgtgctcttcttcatcctaagttgagattacaggag
tttttaagcatatacaacatcacccaggagtttataactgctacagagaagattggtgga
aggttgggatatagcatacgtggaacactgcagtctcaggccaaagcctttgtcgaattc
cagcatgaatctcgtatggcaaaaattaaggcagtgcttgaccaagaaacatgggtggaa
gtcgatgttcctgatgaatttcaggccattgtcgcttcattttttggttctgaagaattg
gtttctgagaacccccatcatgctgaaaataatgtggaaacaagctctagtgaagtgatc
ataaacaatgatggttcactcattacagatactggaccactgaaatctcaacagaaaatt
gatcagactaagattagtggaatatctattgagaatttggaagaaatgaaatctattcct
ttggctcagggcattgaaaaaaataaagctgataccacaacttattcggctcataataac
aatagtaaaatggagcatggaaaatctacctctcatactcttatgtataaaggtgttggt
tatcacatggtaaactgcggcttaatattgctgaagatattgtcggagtatactgatatg
aacaactatttgccagcattatcttcagaaattgttcatcgtgttgttgaaattttaaaa
tttttcaatacaagaacatgtcagcttgttcttggtgctggtgccatgcaggtgtctggt
ctgaagtctatcacttctaaacacttggccctggcgagtcaagtaattggttttacatat
gctactatccccgatatcaggaggattctttttctgaaagtaccagagacacggaaagca
ttgttggtgtcagagattgaccgagttgctcaggatttcaaagttcaccgagatgaaata
catacaaaacttgttcagataatgagagaaaggttattggttcatttgcgtggcttgcct
caaattgttgagagctggaatagacctgaagattcggacccacagcccagtcaatttgcc
cgtgcccttaccaaggaagttggatttcttcaacgtgttttatctcggactttacacgag
gtagatgttcaagtaattttcaggcaagtggtcattatctttcattcacaaatttcagaa
gcattttcacgcttagagatccagagtccacaagcaaagaatagactgtatctagatgtt
aaacacattcttgggtgtattcggtcattgccttccgatgatttgagcaattctggtact
ccaaactgggggaaacttgatgaatttttggtggaaagatttggatctgaagctggccaa
tag
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