Carya illinoinensis (pecan): 122277396
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Entry
122277396 CDS
T08745
Name
(RefSeq) DNA topoisomerase 6 subunit A
KO
K10878
meiotic recombination protein SPO11
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cill03036
]
122277396
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
122277396
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Topo_VI_alpha
COG7
FAM104
Motif
Other DBs
NCBI-GeneID:
122277396
NCBI-ProteinID:
XP_042943302
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Position
9:complement(35980819..35982956)
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AA seq
422 aa
AA seq
DB search
MDDKKRKRRRPEPSSDDETRLPFKNRLKPDSIILESLQDLLRTHSASSSNSKTLTLTELS
LASTCREVTDLSLPSVQSAIESQILKIAHSILSGHGFSFDVPSRSAANQLYVPELDRIVL
KDKTSLRPYANISTVRKSTITTRILQLIHQLCSKNIHVTKRDLFYTDVKLFQDQTHSDSV
LDDVSCMLGCTRSSLNVIAAEKGVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNIDRVGDM
QSDALFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFLRKMKMELKLPVLA
LVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQ
DIKTGKDLLEEDFVKKNPGWVEELTLMVKTKQKAEIQALSTFGFQYLSEVYLPLKLQQRD
WL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggacgacaagaaaaggaaacgtcgccgaccggaaccgagctccgacgacgaaaccaga
ctcccattcaagaaccgcctcaaacccgactcgattatcctcgaatccctccaagacctc
ctcagaactcactccgcttcatcctctaactctaaaaccctaaccctaaccgaactctcc
ctggcctccacatgtcgcgaggtaaccgacctctccctcccctccgtccaatccgctatc
gagtcccaaatcttgaagatcgcccactccatcctctccggccacggcttctccttcgac
gtgccctcccgctccgccgccaatcagctctacgtcccggagctcgaccgcattgtcctg
aaagacaaaacttccctccgcccctacgctaacatctccaccgtccgcaagtccaccatc
actacccgtatcctccagctcatacaccagctctgctccaagaacatccacgttaccaag
cgtgacctcttctacaccgacgtcaagctctttcaggaccagacccactccgattccgtt
ctggacgacgtctcttgtatgctcggctgcactcgctccagcctcaatgtcatcgcagct
gagaaaggggttgttgtgggtcggctgattttcagcgataatggcgacatgatcgattgc
acgaaaatgggaatgggcggaaaggccattccccccaacattgacagagttggggatatg
cagagcgatgcattgtttatactcctggttgagaaggatgcggcatatattcgattggcc
gaggatcggttctataaccggtttccatgtataattgtgacggcaaaggggcagccggac
gttgctactcggttgttcttgaggaagatgaagatggaattgaagctccccgtgcttgca
ctggtggatagcgatccttacgggttgaagattttgtccgtttacggatgcggctccaag
aacatgtcgtacgatagtgctaatttgacgacccctgatataaagtggttggggattagg
ccgagtgatttggataagtataagataccagagcagtgtaggttgccaatgacggagcag
gatattaagaccggaaaggatctgttggaggaagattttgtgaagaagaatcccggatgg
gttgaggagctgactttgatggtgaagacgaagcagaaagcggaaattcaggctttaagc
acgtttggttttcagtacttgtctgaggtctatttgccactcaagctgcagcagagggac
tggctatga
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