Carya illinoinensis (pecan): 122277452
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Entry
122277452 CDS
T08745
Name
(RefSeq) valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122277452
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cill01007
]
122277452
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cill03016
]
122277452
Enzymes [BR:
cill01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
122277452
Amino acid related enzymes [BR:
cill01007
]
Aminoacyl-tRNA synthetase
Class I (U)
122277452
Transfer RNA biogenesis [BR:
cill03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122277452
Prokaryotic type
122277452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
DUF8127
Motif
Other DBs
NCBI-GeneID:
122277452
NCBI-ProteinID:
XP_042943360
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All DBs
Position
9:complement(28501570..28586075)
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AA seq
973 aa
AA seq
DB search
MMLHTLVSSSSSLFSPYCSSASYRLNPLLVSKPRRGVKLFPRWHFSPFRIRPLAAAAATE
NGVFTSPEMAKSFDFTSEERIYNWWESQGYFRPNFDQGSDPFVISMPPPNVTGSLHMGHA
MFVTLEDIMVRYHRMKGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVDLSRDEFTNRV
WKWKEKFGGTIANQIRRLGASCDWTREHFTLDEQLSRAVIEAFVRLHEKGLIYQGSYLVN
WSPNLQTAVSDLEVEYSEESGTLYHIKYRVAGSSDYLTIATTRPETLFGDVAIAVHPKDD
RYSKYIGMMAIVPMTYGRHVPIISDRQVDKDFGTGVLKISPGHDHNDYLLARKLGLPILN
VMNKDGTLNEVAGLYCGLDRFEARKKLWADLEETGLAVKKQPHTLRVPRSQRGGEIIEPL
VSRQWFVSMEPLAEKALLAVEKGELSIIPERFEKIYNHWLSNIKDWCISRQLWWGHRIPV
WYIVGKDFEEEYIVARSADEAREKACQKYGKDVEIYQDPDVLDTWFSSALWPFSTLGWPD
VSAEDFKRFYPTTMLETGHDILFFWVARMVMMGIEFTGTIPFSYIYLHGLIRDSQGRKMS
KTLGNVVDPIDTIQEFGTDALRFTLALGTAGQDLNLSTERLSSNKAFTNKLWNAGKFVLQ
NLPNQDDASAWETVLAYKFDREESLVQLPLPECWVVSKLHLLIDMATASYDKFFFGDIGR
ETYDFFWGDFADWYIEASKARLYSSKGDSVASVAQAVLLYVFENILKLLHPFMPFVTEEL
WQALPQRKEALMVSPWPQTSLPRHANSIKKFENLQALIRAVRNARAEYSVDPGKRISASI
VASEEVIQYVSKEKEVLALLSRLDVHNVRFTNIPPGDAEQSVHLVSGEGLEAYLPLTDMI
DISAEVERLSKRLSKMQTEYDGLRARLSSPKFVEKAPDDVVRGVQEKAAEAEEKIILTKN
RLALLRSTILVTE
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttcatacgttagtttcctccagttcgtctctcttctctccatactgctcttct
gcttcttacagactcaatccccttcttgtctccaagcctcgccgcggcgttaaacttttc
cctcgctggcatttcagtcctttcagaattaggcctcttgcagcagctgctgcaacggag
aatggcgtgtttacttctccagagatggcaaagtcatttgattttacttcagaggaacgg
atatataattggtgggagtctcaagggtattttcggccaaactttgatcaaggaagtgat
ccattcgtgatttcaatgccacctcctaatgtcactggttcactgcacatgggacatgca
atgtttgtgactcttgaggatattatggttagataccatcgaatgaaaggaagaccaaca
ctttggcttcctgggactgatcatgctggtattgccactcagttggtagtggaaagaatg
ctagcatctgaaggaataaaaagagttgacttgagtagggatgagttcacaaacagagtt
tggaagtggaaagagaagtttggtggaaccatcgcaaaccagattaggagacttggtgct
tcttgtgattggactagagaacacttcacccttgatgaacagctaagtcgagctgtaatc
gaggcatttgtcaggcttcatgagaaaggcttaatctatcaaggatcttacttggtaaac
tggtctcccaatttgcagactgcagtttcagatttggaagttgagtattctgaagaatcc
ggtactctgtaccatatcaagtatcgtgttgctggaagtagtgactatctgacaatagca
acaacacgtccagaaactttatttggtgatgtagccattgcagtgcatccaaaggatgat
cgatattccaagtatataggtatgatggcgattgtgcctatgacatatggccgccatgtc
cctatcatctctgacaggcaagttgataaagactttggaactggtgtactgaagataagc
cctggacatgatcataatgattatcttctagcaagaaagcttggtctccctatacttaat
gtcatgaacaaggatgggacacttaacgaagttgctggattatactgcggccttgatcgg
tttgaggcccggaagaagctgtgggcagatctggaggagacgggattggctgtgaaaaag
caaccgcacactctacgggttcccagatcccaacgtggtggagaaataatagagccacta
gttagcaggcagtggtttgttagcatggagcccctggcagagaaagctcttcttgcagtt
gaaaaaggagaattaagcattattcctgaaagatttgagaagatctacaatcactggcta
tcaaatattaaggactggtgtataagcagacaactctggtggggacaccgcatacctgtt
tggtacattgtgggaaaggactttgaagaagaatatatagttgctaggagtgctgatgaa
gctcgtgagaaagcttgtcagaagtatggaaaagatgtagaaatatatcaagatccagat
gttcttgacacatggttttccagtgcgctatggccttttagtacccttggatggccagac
gtgtcagcagaggattttaaacggttttatccaacaacaatgcttgaaactgggcatgac
atattgtttttttgggtggcgaggatggtcatgatgggaattgagttcacagggactatt
ccattctcatacatttatctacatggactcatccgagactcacaagggcgtaaaatgtca
aaaacactgggtaatgtagtagatccaattgatactatccaggaatttggaactgatgct
ttacgattcacacttgcactaggaactgctggtcaggaccttaatttatccacggagaga
ttgtcctccaacaaggccttcactaataaactgtggaatgctggcaagttcgtgttacag
aatttacctaatcaagatgacgcatctgcttgggaaactgtactggcttataagtttgac
agagaggagtctcttgttcagctaccattgccagaatgttgggtggtctcaaaacttcat
ttgcttattgacatggccactgcaagttacgacaaatttttcttcggagacattggaaga
gaaacctatgatttcttttggggtgattttgctgattggtatattgaggccagtaaagct
cgcctttattcctccaaaggtgattcagttgcatcagtggcacaggcagtcctgttgtat
gtttttgaaaacatactaaagttgctgcatcctttcatgcctttcgttactgaggaacta
tggcaggcactcccccaacgaaaagaagctcttatggtgtctccttggccacaaacatca
cttccaaggcatgccaactcaataaagaagtttgaaaatttacaagctctgattagagca
gttcggaatgctcgagcagaatattctgttgatccagggaagcgtatatctgcatctatt
gttgcaagtgaagaagtcatacaatatgtatcgaaggaaaaagaggttttagcactttta
tcccggctagatgttcataatgttcgttttacgaacattcctccaggtgatgcagagcaa
tcagtccacctagtatctggtgaaggactcgaagcatatctccctcttactgacatgatt
gatatctccgcggaagttgaacgtctttctaaacgcctttccaagatgcagactgaatat
gatggactaagggctcgcctaagttctcccaaatttgtggagaaagctcccgatgatgtt
gtccgtggggttcaagaaaaagcagcagaagcagaagaaaagataattctcaccaaaaat
cgtctagctctcctcagatcaaccattctagttacagaataa
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