KEGG   Carya illinoinensis (pecan): 122277704
Entry
122277704         CDS       T08745                                 
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
  KO
K08775  breast cancer 2 susceptibility protein
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03440  Homologous recombination
cill03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    122277704
   03460 Fanconi anemia pathway
    122277704
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cill04121]
    122277704
   03036 Chromosome and associated proteins [BR:cill03036]
    122277704
   03400 DNA repair and recombination proteins [BR:cill03400]
    122277704
Ubiquitin system [BR:cill04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    122277704
Chromosome and associated proteins [BR:cill03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     122277704
DNA repair and recombination proteins [BR:cill03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA complex
     122277704
   FA (Fanconi anemia) pathway
    Downstream FA components
     122277704
SSDB
Motif
Pfam: BRCA-2_OB1 BRCA2 BRCA-2_helical Tower
Other DBs
NCBI-GeneID: 122277704
NCBI-ProteinID: XP_042943730
LinkDB
Position
9:complement(42645419..42654287)
AA seq 1121 aa
MSTWQIFSDAGNSFRWGTSDQNPQIEPEGDSDSPNANHIYSHYTSSSLPSMSDLLLQGCS
KLLDTRGESAGSFPAFQTGLGKLVTVKQSSIAKALSVLGEDTGQVLARDNGCNSSNSLFQ
TGSGKTVNISSDGLVRAKTLLGLEEDTDNCVSQGYQHSAKSNTPFGWRGLSPLEMGEGVN
DSVIKDVRSVPRHLFVSKIGSGGSRLKNHGNPNVMQPEMHSSSLKPPPIKFQTAGGRSLS
VSGDALKRAMSLLGEPGLGTFLNEGDADDSIFSFSKETRLTDTSSNEGNDPRTPFSHEKM
ENCKNMPNIFISPLRSSSYQGRLPVKSEDIIAGNNLIKEFDAVHHGNACRLNSNASSLGK
RLSDGQGGSDTVAKSSLANGVGSRINSFGRSPARPLVDISNTIGTACTNNGQITTVKRIL
GKSSISPFKKPRSSKFSTPLNSTVPFISNGLSTSTSEPSCCKTGISSRYPFKIPRMYVKE
FIKVPPSNQNMSEVLSDQIRCIKSTNAEKYTFRDETGLNCIGPEAFFHMLARTGGLEQYA
SKEWVINHYKWIVWKLACYERYYPSKAAGKFFTMSNVLEELKYRYEREVNHGHRSAIKRI
LEGDASPSLMMVLCISAVCSNCDLKNDTSSVAETGAQNSNATKVELTDGWYAMDAVLDAQ
LSKQLAAGKLFVGQKLRIWGAGLCGWVGPVSPLEVSRTVSLLLHINGTYRTHWADRLGFC
KGVGAPLAFRCIKSNGGPVPLTLVGVRRIYPLLYKERLSNGGSIVRSERMESKMVQLYNQ
RRSTVVEGIVSEFQRGAKDSNNYNDTDSEEGAKILRILETAAEPEVLMAEMSPEQLTSFA
TYQAKLEATKQSDMEKAIKKAFEGTGLGEREVTPFMRVRVVGLTNKIYHGKDSPKEGLIT
IWNPTDKQQHELAEGQAYSVAGLVPINSDANTLYLQARGSTTKWQPLSSQVTEHFMRFHS
PRKSVLLSGLGEVPLSSEFDIAAVVVYVGEVFADPHQRKQWVFVTDGSISESRSEELSNS
LLAISFCSSDIDDSSFAPVNSNLAGSTVGFCNLIKRAKDQMNHLWVAEATENSIYFLNLD
PRPCSHLKNAASLTQKWARMSSLTLDKLREKVLFIIGDCKG
NT seq 3366 nt   +upstreamnt  +downstreamnt
atgtctacatggcagatattctccgatgccggcaacagcttccggtggggaacctccgac
caaaatccccaaatcgaacccgaaggtgattctgattcaccaaatgctaatcatatctac
agtcactacactagctctagtctgccttccatgtccgatctcctgctccaagggtgttct
aagcttctggatactcgcggtgaaagtgcggggagctttccggcattccaaactggattg
ggaaaattggtcaccgtgaaacagtcttcgatagcgaaagcattatctgttcttggcgaa
gatacaggccaagtgctagctagagataatggatgtaattcctcaaattctctattccag
actggctctggtaaaactgtcaatatatcttcagatggtctggttagagccaagacattg
ttgggattggaagaagatactgataattgcgtttctcaaggctatcaacattcggcaaaa
tcaaatacgccatttgggtggcgaggtttatctcctctagaaatgggagagggagtgaac
gatagtgtgattaaggatgtcaggtcagttccaagacatttgtttgtttctaagattggt
tcaggaggaagtagattgaagaatcatggaaatccaaacgttatgcaacccgaaatgcat
agttcatctctcaaaccacctccaatcaagttccaaactgctggtggaagatctctatct
gtctctggtgatgcactgaaacgtgcaatgagccttcttggtgaaccagggctgggaact
ttcttgaatgaaggggatgcagatgattcaattttttctttttcaaaggagacaagattg
actgatacttcatcaaatgagggaaatgatcctcggactcccttttctcatgagaaaatg
gaaaattgcaaaaatatgccaaatattttcatatccccattacggtcgtcttcttatcaa
gggcggttgcccgtcaagtcagaagatattattgcagggaataacttgatcaaggaattt
gatgctgttcaccatggcaatgcttgtaggttaaacagtaatgcatcttctcttgggaag
cggttaagtgatggccaaggtggttccgacacagtagcaaaaagttctttggctaatggt
gtcggttcaaggattaattcatttggacggtcaccagccaggccattggttgatatttca
aataccattggcacggcttgtacaaataatggacagataactactgtaaagagaatactc
gggaaaagttctatttctccatttaaaaagccccgcagctccaaattttccacccctttg
aatagtactgttccatttatttccaatggtttatctacttcaacatctgaaccttcatgc
tgcaaaactggaatttcctcacgctacccatttaagattccaagaatgtatgttaaggaa
tttattaaagtacctccgtcaaaccagaatatgtcagaggttttgtcagaccagatcaga
tgcatcaaatcaactaatgcagaaaagtatacttttcgtgatgaaactggattaaattgc
attggcccagaagcttttttccacatgttggctcggaccggaggattagagcaatatgct
tcaaaagagtgggtcataaatcactacaagtggattgtttggaaactagcatgttatgag
agatactatccctctaaagctgctggaaaattttttaccatgtccaatgtgctcgaggaa
ttgaagtatagatatgaaagagaagtcaatcacggccaccgctctgcaattaaaagaata
ctggaaggggatgcatcgccttctttgatgatggttctatgcatttcagcagtttgctca
aattgtgatctgaagaatgatacttcttccgtggcagaaactggggctcaaaatagtaat
gcaacaaaagttgaactaactgatgggtggtatgcaatggatgctgttttggacgcacag
ctatcaaagcagcttgctgctggaaaactgtttgtgggacagaaacttcggatctgggga
gcaggattatgcggctgggttgggcctgtttcaccccttgaggtgtcaaggacagttagt
ttgctattgcacataaatgggacgtacagaactcattgggctgatcgactgggattctgt
aaaggcgttggtgctcctttagcatttaggtgcattaagagtaatgggggtcccgtgcct
ctgactttagttggagtcagacggatataccctctcctctacaaggagaggttaagtaat
ggaggatctattgtgagatcagagaggatggagagtaaaatggtgcaattgtacaatcag
aggcgatctactgttgtagagggcattgtttctgagtttcaaagaggcgcaaaagattca
aataattataatgacactgatagtgaagaaggagcaaaaattttgaggatacttgagacg
gctgcagaacctgaagtattaatggcagagatgagtccggagcagctaacctcttttgct
acttatcaagcaaaactagaggcaaccaagcagtcagacatggagaaagcaatcaagaaa
gctttcgaaggtactggcttaggtgagagagaagtcaccccatttatgagagtgagagtg
gttggattaacaaataaaatctatcacggaaaggacagcccgaaagaagggttgataaca
atctggaacccaacagacaagcagcaacatgagctggccgagggtcaggcttattccgtt
gcaggacttgtacctattaattctgatgcaaataccctatacttgcaagccaggggatcc
actaccaaatggcagcctttatcttcccaagtaaccgaacactttatgcgatttcacagt
cctcgcaaatcagtcttactgtcgggtttgggtgaggttccactttccagtgagtttgat
attgctgcggtcgtagtgtacgtgggggaggtttttgcagaccctcaccaaaggaaacag
tgggtgtttgtgacggatggctccatttctgagtcacggtcagaggaattatccaattct
ttacttgccatcagcttctgctcatcagacattgatgattcatcatttgcaccagtcaac
tctaatcttgcaggatccacggttggtttttgtaatctcatcaagagagcgaaggaccaa
atgaatcatctctgggtagcagaagctacagaaaattcaatctactttctaaatcttgat
cctcgcccttgttctcacctaaaaaatgcagcttccttaacgcaaaaatgggcaagaatg
tctagtttgactttggataagcttagagagaaggttttatttatcattggtgattgtaag
ggctag

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