KEGG   Carya illinoinensis (pecan): 122277710
Entry
122277710         CDS       T08745                                 
Name
(RefSeq) WD repeat-containing protein 3
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    122277710
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cill03009]
    122277710
Ribosome biogenesis [BR:cill03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    122277710
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd WD40_Gbeta WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Utp12 Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd DSE1_N NBCH_WD40 Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_Aladin WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_NOL10_N Beta-prop_WDR41 CFAP251_N ASA1 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_SPT8 PEP5_VPS11_N Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_ACSF4 Beta-prop_HPS5 Beta-prop_IP5PC_F PAC11 Beta-prop_LRRK2 WDR54 Beta-prop_WDR19_1st PROPPIN Utp8_b_propeller CDtoxinA Beta-prop_WDR35_TULP_N WD_LRWD1 KNTC1_N Beta-prop_pof12 Beta-prop_WDR11_2nd Utp13 TRM82_WD
Other DBs
NCBI-GeneID: 122277710
NCBI-ProteinID: XP_042943737
LinkDB
Position
9:412246..420301
AA seq 937 aa
MVKAYLRYEPAAAFGVIVSVESNIIYDSSGKYLLAPALEKVGVWHVRQGLCTKYLAPSPA
SRGPSLAVTSIASSPSSMIASGYADGSIRIWDSEKGTCETTLNGHKGAVTVLRYNKLGSL
LASGSRDNDIILWDVVGETGLYRLRGHRDQVTDLVFLDSGKKLVSSSKDKFLRVWDLETQ
HCMQIVSGHHSEIWSIDIDPEERFLVSGSADVELRCYALKHDLVDGQYVSWINGDSSTQN
KWEVLKLFGEIQRQSKDRVSTVKFNKSGNLLACQVAGKTVEIFSILDEVKAKRKAKRRLH
RKKEKEAAKGAAEVMENGDTNHGTGEDGNIPLVTATDVFKLLHIVRASKKICSISFCPMT
PKNFLATLALSLNNNILEFYSIDNSGATKSLSFELQGHRSDVRSVTLSSDNSLLMSTSHN
AVKIWNPSTGSCLRTVDSGYGLCGLIIPQNKYALVGTKEGTLEIIDMGSGTCLEAVEAHG
GSVRSIAALPNENGFVTGSADHDVKFWEYRIKQQSGQDTKHLTVSNVRTLKMNDDVLAVA
VSPDAKYIAVALLDCTVKVFFVDSLKFFLSLYGHKLPVLCMDISSDGDLIVTGSADKNLK
IWGLDFGDCHKSIFAHADSVMGVQFVHNTHYMFSVGKDRLVKYWDADKFELLLTLEGHHA
DVWCLAVSNRGDFIITGSHDRSIRRWDRTEEPFFIEEEKEKRLEEMFESDLDNAFGNRYA
TKEEVPEEGAVALAGKKTQETLTATDLIIDALDLAEVELKRIAEHEDERNRGKVTEFQPN
VIMLGHSPSDYVLRALSNVHTNDLEQTLLALPFSDALKLISYLKDWTSNPDKVELICRVA
TVLLQTHHNQLVTTPAARPVLTVLKSILYARVKECKDTLGFNLAAMDHIKQLMASRSDAP
FRDAKSKLLEIRAQHSKRLDARLETKEEKRKKKKQKK
NT seq 2814 nt   +upstreamnt  +downstreamnt
atggtgaaggcttaccttcggtacgagcccgcagcggccttcggagtcattgtctccgtg
gagtccaacatcatttacgacagctccggaaaatacctcctagctccggcgctcgagaag
gttggcgtctggcacgtgcgccagggcctttgtaccaaatatcttgctccttcgccggcc
tctcgcggcccctctcttgccgtcacctccattgcctcttccccttcctcaatgatcgcc
agtggctatgcagatggcagcataagaatttgggatagcgaaaaaggaacctgtgagacc
acattaaatggacataaaggggctgtgactgtacttcgatacaataagcttggatccttg
cttgcttctggaagcagggataatgatataatactatgggatgtggttggcgagactggc
ctgtatcgccttcgcgggcatcgtgatcaggtcactgaccttgttttcttagattctggt
aagaaacttgttagttcctccaaagacaaattcttgagagtatgggatcttgaaactcaa
cactgtatgcaaatagttagtggccatcacagtgaaatatggtccatagacattgatcca
gaggaaagatttctggtcagtgggtctgcagatgtagaactccgatgttacgccctcaag
catgacttggtagatggacaatatgtatcttggataaatggagattcatccactcaaaac
aaatgggaggttttgaagctgtttggtgaaattcagcgacaaagcaaagatagagtctca
actgtgaaattcaacaaatcagggaatttgcttgcctgtcaagttgcaggaaagacagtc
gagatattcagcatactggatgaggtcaaagcaaagcgtaaagcaaaacggaggcttcat
cggaagaaagaaaaagaagctgcaaaaggggcagctgaggttatggaaaatggggacaca
aatcatggcaccggagaggacggaaatatcccattggttactgccactgatgtttttaag
cttcttcatattgtgcgggctagcaaaaaaatatgttccatttctttctgtccaatgact
ccaaagaactttctggccactctggcattgtctttgaacaacaatatattggaattttat
tccattgataacagtggtgccacaaaatcactttcttttgagctccaaggacaccgttct
gatgtcagaagtgtaacccttagttcagacaactctcttttgatgtcaactagtcacaat
gcagtaaaaatttggaatccaagtactggttcttgccttcgaactgttgactctgggtac
ggactatgtggtttaattattcctcagaacaagtatgcacttgttggaactaaagaagga
actcttgaaattattgacatgggaagtggaacttgtcttgaagcagtggaagctcatggt
ggctctgttcggtcaattgcagcacttcccaatgaaaatggttttgtcacaggcagtgct
gatcatgatgtcaagttctgggaataccggattaagcagcaatctggtcaagatactaaa
cacctaacagtttcaaatgtgaggactttgaagatgaatgatgatgttcttgcggttgca
gtaagccctgatgccaagtatattgctgttgcactgttggattgtacggtgaaggttttc
tttgtggattcacttaaattttttctttccttatatggtcacaagctacctgtgctatgt
atggatatttcatctgatggcgatttgattgtgactggctctgctgacaaaaatttaaag
atctggggcttggattttggtgactgccataagtccatttttgctcatgctgatagtgtt
atgggagtgcaatttgtgcacaatactcattacatgtttagtgtggggaaagaccgctta
gtaaaatactgggatgctgataaatttgagttgcttttaacacttgagggacatcatgct
gatgtttggtgccttgcagtcagcaaccgtggtgatttcattatcactggatctcacgac
cgatccatacgtcgttgggatcgtactgaagaaccatttttcattgaggaggagaaagaa
aaaaggttggaagagatgttcgaatctgatcttgacaatgcatttggaaacaggtatgca
accaaagaagaagtccctgaggagggtgctgtggccttagcagggaagaagactcaggaa
acccttacagcaaccgacttaattattgatgcactagacttagcagaggtagaactgaag
cgtattgctgaacatgaggatgagagaaacagggggaaagttactgaattccaaccaaat
gtcatcatgcttgggcactcgccatctgattatgttctccgtgcactttctaatgttcac
accaatgatctagagcagacgttgctggctttaccgttctctgatgctttgaagcttata
tcttacttgaaggattggacttcaaatcccgataaggttgagctcatttgcagggtcgct
acagtgctgttgcagacacatcataatcagttggttactacccctgctgccagacccgtg
cttacagttcttaagagcattctttatgcaagagtcaaggaatgcaaagacacacttggt
ttcaaccttgctgctatggatcatataaagcaactaatggcttcaagatccgatgcacca
tttcgagatgcaaaatcaaagttactagaaatacgtgcacaacattcaaaacgtttagat
gcaaggttagagacaaaagaagaaaagcggaaaaagaagaaacagaagaaatga

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