Carya illinoinensis (pecan): 122277710
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Entry
122277710 CDS
T08745
Name
(RefSeq) WD repeat-containing protein 3
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122277710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cill03009
]
122277710
Ribosome biogenesis [BR:
cill03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
122277710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Utp12
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
DSE1_N
NBCH_WD40
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_NOL10_N
Beta-prop_WDR41
CFAP251_N
ASA1
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_SPT8
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_NWD2_C
Beta-prop_ACSF4
Beta-prop_HPS5
Beta-prop_IP5PC_F
PAC11
Beta-prop_LRRK2
WDR54
Beta-prop_WDR19_1st
PROPPIN
Utp8_b_propeller
CDtoxinA
Beta-prop_WDR35_TULP_N
WD_LRWD1
KNTC1_N
Beta-prop_pof12
Beta-prop_WDR11_2nd
Utp13
TRM82_WD
Motif
Other DBs
NCBI-GeneID:
122277710
NCBI-ProteinID:
XP_042943737
LinkDB
All DBs
Position
9:412246..420301
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AA seq
937 aa
AA seq
DB search
MVKAYLRYEPAAAFGVIVSVESNIIYDSSGKYLLAPALEKVGVWHVRQGLCTKYLAPSPA
SRGPSLAVTSIASSPSSMIASGYADGSIRIWDSEKGTCETTLNGHKGAVTVLRYNKLGSL
LASGSRDNDIILWDVVGETGLYRLRGHRDQVTDLVFLDSGKKLVSSSKDKFLRVWDLETQ
HCMQIVSGHHSEIWSIDIDPEERFLVSGSADVELRCYALKHDLVDGQYVSWINGDSSTQN
KWEVLKLFGEIQRQSKDRVSTVKFNKSGNLLACQVAGKTVEIFSILDEVKAKRKAKRRLH
RKKEKEAAKGAAEVMENGDTNHGTGEDGNIPLVTATDVFKLLHIVRASKKICSISFCPMT
PKNFLATLALSLNNNILEFYSIDNSGATKSLSFELQGHRSDVRSVTLSSDNSLLMSTSHN
AVKIWNPSTGSCLRTVDSGYGLCGLIIPQNKYALVGTKEGTLEIIDMGSGTCLEAVEAHG
GSVRSIAALPNENGFVTGSADHDVKFWEYRIKQQSGQDTKHLTVSNVRTLKMNDDVLAVA
VSPDAKYIAVALLDCTVKVFFVDSLKFFLSLYGHKLPVLCMDISSDGDLIVTGSADKNLK
IWGLDFGDCHKSIFAHADSVMGVQFVHNTHYMFSVGKDRLVKYWDADKFELLLTLEGHHA
DVWCLAVSNRGDFIITGSHDRSIRRWDRTEEPFFIEEEKEKRLEEMFESDLDNAFGNRYA
TKEEVPEEGAVALAGKKTQETLTATDLIIDALDLAEVELKRIAEHEDERNRGKVTEFQPN
VIMLGHSPSDYVLRALSNVHTNDLEQTLLALPFSDALKLISYLKDWTSNPDKVELICRVA
TVLLQTHHNQLVTTPAARPVLTVLKSILYARVKECKDTLGFNLAAMDHIKQLMASRSDAP
FRDAKSKLLEIRAQHSKRLDARLETKEEKRKKKKQKK
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggcttaccttcggtacgagcccgcagcggccttcggagtcattgtctccgtg
gagtccaacatcatttacgacagctccggaaaatacctcctagctccggcgctcgagaag
gttggcgtctggcacgtgcgccagggcctttgtaccaaatatcttgctccttcgccggcc
tctcgcggcccctctcttgccgtcacctccattgcctcttccccttcctcaatgatcgcc
agtggctatgcagatggcagcataagaatttgggatagcgaaaaaggaacctgtgagacc
acattaaatggacataaaggggctgtgactgtacttcgatacaataagcttggatccttg
cttgcttctggaagcagggataatgatataatactatgggatgtggttggcgagactggc
ctgtatcgccttcgcgggcatcgtgatcaggtcactgaccttgttttcttagattctggt
aagaaacttgttagttcctccaaagacaaattcttgagagtatgggatcttgaaactcaa
cactgtatgcaaatagttagtggccatcacagtgaaatatggtccatagacattgatcca
gaggaaagatttctggtcagtgggtctgcagatgtagaactccgatgttacgccctcaag
catgacttggtagatggacaatatgtatcttggataaatggagattcatccactcaaaac
aaatgggaggttttgaagctgtttggtgaaattcagcgacaaagcaaagatagagtctca
actgtgaaattcaacaaatcagggaatttgcttgcctgtcaagttgcaggaaagacagtc
gagatattcagcatactggatgaggtcaaagcaaagcgtaaagcaaaacggaggcttcat
cggaagaaagaaaaagaagctgcaaaaggggcagctgaggttatggaaaatggggacaca
aatcatggcaccggagaggacggaaatatcccattggttactgccactgatgtttttaag
cttcttcatattgtgcgggctagcaaaaaaatatgttccatttctttctgtccaatgact
ccaaagaactttctggccactctggcattgtctttgaacaacaatatattggaattttat
tccattgataacagtggtgccacaaaatcactttcttttgagctccaaggacaccgttct
gatgtcagaagtgtaacccttagttcagacaactctcttttgatgtcaactagtcacaat
gcagtaaaaatttggaatccaagtactggttcttgccttcgaactgttgactctgggtac
ggactatgtggtttaattattcctcagaacaagtatgcacttgttggaactaaagaagga
actcttgaaattattgacatgggaagtggaacttgtcttgaagcagtggaagctcatggt
ggctctgttcggtcaattgcagcacttcccaatgaaaatggttttgtcacaggcagtgct
gatcatgatgtcaagttctgggaataccggattaagcagcaatctggtcaagatactaaa
cacctaacagtttcaaatgtgaggactttgaagatgaatgatgatgttcttgcggttgca
gtaagccctgatgccaagtatattgctgttgcactgttggattgtacggtgaaggttttc
tttgtggattcacttaaattttttctttccttatatggtcacaagctacctgtgctatgt
atggatatttcatctgatggcgatttgattgtgactggctctgctgacaaaaatttaaag
atctggggcttggattttggtgactgccataagtccatttttgctcatgctgatagtgtt
atgggagtgcaatttgtgcacaatactcattacatgtttagtgtggggaaagaccgctta
gtaaaatactgggatgctgataaatttgagttgcttttaacacttgagggacatcatgct
gatgtttggtgccttgcagtcagcaaccgtggtgatttcattatcactggatctcacgac
cgatccatacgtcgttgggatcgtactgaagaaccatttttcattgaggaggagaaagaa
aaaaggttggaagagatgttcgaatctgatcttgacaatgcatttggaaacaggtatgca
accaaagaagaagtccctgaggagggtgctgtggccttagcagggaagaagactcaggaa
acccttacagcaaccgacttaattattgatgcactagacttagcagaggtagaactgaag
cgtattgctgaacatgaggatgagagaaacagggggaaagttactgaattccaaccaaat
gtcatcatgcttgggcactcgccatctgattatgttctccgtgcactttctaatgttcac
accaatgatctagagcagacgttgctggctttaccgttctctgatgctttgaagcttata
tcttacttgaaggattggacttcaaatcccgataaggttgagctcatttgcagggtcgct
acagtgctgttgcagacacatcataatcagttggttactacccctgctgccagacccgtg
cttacagttcttaagagcattctttatgcaagagtcaaggaatgcaaagacacacttggt
ttcaaccttgctgctatggatcatataaagcaactaatggcttcaagatccgatgcacca
tttcgagatgcaaaatcaaagttactagaaatacgtgcacaacattcaaaacgtttagat
gcaaggttagagacaaaagaagaaaagcggaaaaagaagaaacagaagaaatga
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