Carya illinoinensis (pecan): 122277750
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Entry
122277750 CDS
T08745
Name
(RefSeq) E3 ubiquitin-protein ligase HAKAI homolog isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122277750
04131 Membrane trafficking [BR:
cill04131
]
122277750
04121 Ubiquitin system [BR:
cill04121
]
122277750
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122277750
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
122277750
Membrane trafficking [BR:
cill04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
122277750
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122277750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
122277750
NCBI-ProteinID:
XP_042943791
LinkDB
All DBs
Position
9:40885356..40891873
Genome browser
AA seq
496 aa
AA seq
DB search
MLQIRLRPSSEGAGGAKPLPVETVTVACPDHLVLADLPVAKGIGAATSASLVKTVGRRSR
RPLGERVHFCVRCDFPISIYGRLSPCEHAFCLDCARSDSICYLCDERIQKIQTIKMMEGI
FICAAPHCLKSFLKRSDFESHIHESHANLLQPNAEKEDGNESESQLSKQPSASDSTARGP
PRPVFSPGSNSQLHDREDKTHRQQPREPPPPRPVIQPKQPSFGQVQNHPSELQPDNNRPQ
GFDRLGPQNRFHQQIFDTHATTQQESGQFPDKQQGILSESPFPDYPPMHSFQPPNFALPV
NSNPMLNPPLPFGYPPFQPEGGQPFYGTPYEVTRQDSASEAGAEQGSLLGFPPVQAGVVN
FPAAYAQPWNAGFAGLPFEHPPGGQGIADGFTNASDSHGKAPFHQGEFGRSPGGLPSNPP
PPMANKGMEQVQSGNLMDPRDGKGILAPQPLTLPPPPPPRTHSSQLKRKFYPDASRDGQG
YGWQHENRDSYGSGQE
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagatccggcttaggccatcctcagaaggtgctggaggggcgaagcccttgcct
gtggaaactgtgacagtcgcatgccctgaccaccttgtccttgctgatctccctgtagca
aagggtattggtgcagcaacttccgcttcccttgtcaagactgttggtcgtaggtcccgt
cgccctcttggtgagagagtccatttttgtgttcgctgtgattttcccatctctatctat
gggcgcctgagtccttgtgagcatgccttctgtctcgattgtgctaggagtgattcaata
tgctacctttgtgatgagcgtatacagaagattcagacaattaaaatgatggaagggata
ttcatctgtgcagcaccacattgtctcaagtcttttttaaagaggtctgattttgaatct
catatccacgagagccatgctaaccttcttcaacccaatgccgagaaagaagatggaaat
gagtcagagtctcaactttccaaacaaccgtctgcttcggactccactgcccgtggtcct
ccaagaccagtcttttctcctggttcaaattcccaacttcatgatcgtgaagacaaaact
catcgacagcaacctagagaaccgccgcctccaaggccagtcatacagccaaagcaacca
agctttggccaagtacaaaatcacccttcagagctgcaacccgacaacaaccgaccgcaa
ggctttgacaggctgggcccccagaaccgcttccatcaacagatttttgacacccacgcc
accacacaacaagaatctggccagtttccagacaaacagcaaggaatcctatctgagagt
ccatttcctgattacccacccatgcattcctttcagccacctaattttgccttgccagtt
aattcaaatccaatgctaaatcctcctctcccttttggatatcctcctttccagcctgag
ggaggtcaaccattttatggcactccatatgaggttacgcggcaggattcagcttcagaa
gcaggagcagaacagggatcattgttgggtttcccaccagttcaagcaggtgttgtgaat
ttcccagcagcgtatgctcagccctggaatgcaggctttgctggtttgccttttgagcat
ccacctggtggtcaaggcattgcagatggtttcacaaatgcatcagattctcatgggaaa
gctccatttcatcaaggtgagtttggacgcagtcctggaggtttgccttcaaatcctccc
ccgcctatggccaataagggaatggaacaagtgcagagtggcaatttaatggatccaagg
gatggcaagggtatattagcaccacagcccctgacactcccaccaccacctccaccccga
actcattcctcgcaacttaaaagaaagttctatcccgatgctagccgtgatggacagggt
tatgggtggcagcatgaaaaccgtgatagctatgggagtggccaggaatag
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