Carya illinoinensis (pecan): 122277788
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Entry
122277788 CDS
T08745
Name
(RefSeq) nuclear pore complex protein NUP93A isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122277788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122277788
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122277788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_12
TPR_14
TPR_2
TPR_8
TPR_1
PrmA
Motif
Other DBs
NCBI-GeneID:
122277788
NCBI-ProteinID:
XP_042943870
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All DBs
Position
9:complement(4056438..4074130)
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AA seq
868 aa
AA seq
DB search
MANEQGMSGWTDLLHSSTKLLEQAAPSAQFPPLQRNLDQLEALSKKLKAKTLRTEAPSQS
NAATRLLAREGINAEQLARDLKSFELKTTFEDVFPAEATSVEEYLQQVHEMAMVSAIQEA
QKDNLRSFNDYMMKVLEEDWQKEKRDFLQSLSRISTLPRANVMNTRGSHPGQIVSIASNH
QVSPGPSTMDLVPLGNKPILEKKASVYAEVVKNLNNARERGLPFKPATAFKGAYESLGLE
GSSGKSVNMQKIWHLIQMLMGEDSTVQRNVSKKMSLVIGARRHLEWGHEKYIMDTIQSHP
AQAALGGAVGNLQRIRAFLRIRLRDYGVLDFDAGDARRQPPVDTTWQQIYFCLRTGFYDE
ARTVALSSRASHQFAPLLTEWTNTGGMVSSETAAAATDECEKMLRLGDRVGRAAYDKKKL
LLYALISGSRKQIDRLLRDLPTLFNTIEDFLWFKLSAVRDYPSGASSITLNEGLVPYSLD
DLQVYLNKFDPSYYTKNGKDPLVYPYVLLLSIQLLPAVMYLSKEMGDEGYNIDAAHFSIV
LGDHGVLSEGASAGQKLGVMDAYAEASSMIRQYGSVYLRLGDLSMALEYYAQAAAVVGGG
QLSWTGRGNVDQQRQRSLMLKQLLTELLLRDGGIYLLLGSRGTGEEGELGRFLNDAKARH
QFLLEAARRCQEAGLYDKSIEIQKRVGAFSPALDTINKCLSDAVCAFSHGRLDGDSRTAG
LIHSGNEILETYKYYPEVRSPEYLSSPQEREHVLEQQTVLRQLEAILSIHKLAIMGHHLD
ALREVAKLPFLPLDPRVPDITVDVFQNLSSHVQACVPELLKVALTCLDNLTDTDGSLRAL
RAKIASFIANNLNRNWPSDLYEKVARSL
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaacaaggcatgagtggctggaccgatctgctccattcttcaacgaagctt
ctcgaacaagccgctccttccgctcagttccctcctcttcagagaaacttagatcagtta
gaagcattatctaagaaactcaaagctaaaaccctacgaactgaggctccttctcaatct
aatgctgccacaaggctacttgcgcgagagggcataaatgcagagcaacttgcacgggat
ctgaagtcctttgaattgaagacaacatttgaggatgttttccctgctgaggcaacaagt
gttgaggagtatttacagcaggttcatgagatggcaatggtttcagccattcaggaagct
cagaaggataaccttagaagctttaatgattacatgatgaaagttttggaggaggactgg
caaaaggaaaaacgtgattttcttcagagtttaagccgaatttcaacattgcctcgggct
aacgtgatgaatactaggggttctcatccaggtcaaattgtgtccattgcatctaaccat
caagtttcacctggcccatctactatggatcttgtacctctaggtaacaagcctatcctt
gagaaaaaggcatcagtctatgctgaagttgtgaagaatctaaataatgcaagggagcgt
ggtttgccatttaagcccgctacagctttcaagggcgcttatgaaagtttgggccttgag
ggatctagtggaaaatctgttaacatgcagaagatctggcacctcattcagatgttgatg
ggtgaggattcaactgtgcaacgaaatgtttcaaaaaagatgtcattagtcattggtgca
aggcgccacctggaatgggggcatgagaaatatatcatggatacaatacaaagtcatcct
gctcaggctgctcttggtggggctgttggaaatttgcaaagaattcgtgcctttcttcgg
attcgtttaagggattatggagttctagattttgatgctggtgatgctcgtagacaacct
cctgttgataccacctggcagcagatctatttttgcttgagaactggattttatgatgaa
gcaagaactgttgctctgtcatcccgtgcttcacaccaatttgctcccctgcttacagag
tggaccaatactggagggatggtatcatccgagactgcagctgctgcaacagacgaatgt
gaaaaaatgttaagactgggtgatcgagtgggccgagccgcatatgataagaaaaagtta
ttgctgtatgctctcatatctggttctcgcaagcaaattgatcgtctgcttagagatcta
ccaactctgttcaatactatagaggatttcttatggttcaaactctctgctgtacgggac
tacccaagtggagcctcatccattactctgaatgaggggttggtaccatacagtttggac
gacctacaggtctacctgaacaaatttgatccatcatattacacaaaaaatggaaaggat
cctttggtatacccttatgttttgctcttaagtatccagttgctgccagctgtcatgtac
ttgtctaaggaaatgggagatgaaggatataacattgatgctgcccacttttcaattgtg
ttgggagaccatggggtcctttctgaaggtgccagtgccgggcaaaaactgggagtgatg
gatgcttatgctgaggcgtctagtatgattcggcagtatggatctgtatacttgcgtctt
ggagatctatcaatggcattagaatattatgcacaagcagctgctgtggtgggtggtgga
cagctatcatggactggaagaggtaacgtggatcagcaaaggcagagaagcttaatgttg
aagcaacttcttactgagctgttgttacgggacggtgggatctatcttttactgggctca
agaggtacaggagaagaaggtgagttgggaaggtttttgaatgatgcaaaagctagacat
caatttctgcttgaagctgctcgtcggtgtcaggaagctgggctttatgacaaatctata
gaaattcagaagagagttggggctttttcaccggcactggataccatcaataagtgcctc
tctgatgcagtatgcgctttctcacatggtagattagatggtgatagccggaccgctggc
ctcatccattctggcaatgagatactggagacatataaatattatcctgaagtcagatca
cctgaatatctgtccagtcctcaagagagagagcatgttttggagcaacaaactgtgtta
agacaacttgaggcaatattatcaatccacaagttggcaataatgggccatcatctagat
gctttaagggaggttgccaaacttccatttcttccattagatccacgagtgccagatatt
actgttgatgtgttccagaatttatcttctcatgtacaagcttgtgttccggaacttctg
aaggttgctctcacctgcctggacaatttgacagatactgatggatcactccgtgcattg
agggctaagattgcaagctttattgctaataatttgaataggaattggcctagtgatctg
tatgaaaaggtcgcccgaagcttgtga
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