Carya illinoinensis (pecan): 122277806
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Entry
122277806 CDS
T08745
Name
(RefSeq) probable DNA helicase MCM8 isoform X1
KO
K10737
DNA helicase MCM8 [EC:
5.6.2.4
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cill03032
]
122277806
03400 DNA repair and recombination proteins [BR:
cill03400
]
122277806
Enzymes [BR:
cill01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
122277806
DNA replication proteins [BR:
cill03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
122277806
DNA repair and recombination proteins [BR:
cill03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
122277806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
WHD_MCM8
MCM_OB
MCM_lid
Mg_chelatase
AAA_5
AAA_3
Sigma54_activat
AAA_16
AAA_22
AAA
Motif
Other DBs
NCBI-GeneID:
122277806
NCBI-ProteinID:
XP_042943906
LinkDB
All DBs
Position
9:35492276..35500275
Genome browser
AA seq
800 aa
AA seq
DB search
MSVSMGMDYASVDSSGYWDVLTSYFPQQLFPAVEESWLKLISELFCFFSTPPGQDLASQV
KDDDGVFVLSMDFQQFQKICGIEEFYFMLEDKPKIALLCASAAIHKVLLTKWEKKNVENG
VKVIIHLHNYPEIMIALKNLKAAYIDKLVSVRGTVVKASTVRPLVVQMSFDCAKCKTEIT
RIFPDGKFSPPPSCDLNGCKSKNFNPIRSTAQTIDFQKIRLQELLKSEDHEEGRVPRTVE
CELTQDLVDACIPGDVVTVTGIIRVINNYMDIGGGMQTSLFSGKSKSKNQGFYYLYLDAV
SIKNSKSQSTAEDLQDSNSKARATELLDLFSFSPRDLEFIVKFLEEHGSDIFKQILQSIC
PSIYGHELVKAGITLALFGGVRKHSKDRNKVPVRGDIHVIVVGDPGLGKSQLLQAAAALS
PRGIYVCGNATTKAGLTVAVVKDPMTSDYAFEAGAMVLADSGLCCIDEFDKMSAEHQALL
EAMEQQCVSIAKAGLVASLSARTSILAAANPVGGHYNRAKTVNENLKMSAALLSRFDLVF
ILLDKPDELLDKRVSEHIMSLHSGYGEHSPATKKRRDEASQSAGGIDIHANGGSLVSRLR
LDPKKDSDFFPVPAQLLRKYITYARTYVFPRMSKPAAEILQKFYLQLRGHDASADGTPIT
ARQLESLVRLAEARARLELREEITAQDALDVVEIMKESLYDKYVDEHGFVDFGRSGGMSQ
QKEAKRFLSALNKQSELDQKDCFSISEIYGLADRIGLRVPDIDTFVDNLNSVGYLLKKGP
KMYQVLSSSYSCSQSSRLRS
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgagcatgggtatggactacgcctccgtagactcgagcggctactgggacgtc
ttgacctcctacttcccccagcagttattcccggccgtcgaagaaagttggctcaagctc
atttctgagctcttttgcttcttttctactccaccaggccaagatctcgcttctcaggtt
aaagatgatgatggtgtcttcgttttgtcaatggactttcaacaatttcaaaaaatatgt
gggattgaggaattttattttatgttggaggataaacctaaaatagctctcttgtgtgcg
agtgctgcaattcacaaggttctgttgaccaaatgggagaagaagaatgtggagaatggc
gtgaaagttataatacatctccacaactaccctgaaattatgattgctctaaagaactta
aaagcggcttatattgacaagcttgtatctgttcgtggtactgttgtaaaggctagcact
gtcagacctctagtggtgcaaatgagttttgactgtgcaaaatgtaaaacagaaattacg
cgtatttttcctgatggaaaattttcaccaccaccgagttgtgatttaaatgggtgcaag
agtaaaaacttcaatccaattcggtctactgctcaaacaatagattttcagaaaataagg
ctgcaggaacttttaaagtcagaagatcatgaagaaggccgggtgcctcgaacagtagaa
tgtgaactgactcaagatcttgttgatgcctgcatacctggtgatgtggtgactgtcact
ggaattatcagagtaatcaacaattacatggatatcggaggaggtatgcaaacttcatta
ttttcaggaaaatcaaaaagtaaaaatcaagggttttactatttgtatttagacgctgtt
tcaataaaaaactccaaatcgcagtccacagctgaggatttgcaagattctaattctaaa
gctagagctacggagctgcttgatttattctcattttctccacgggacttggaattcatt
gtgaagttcttggaggaacatggttcagatatattcaagcaaatacttcaatccatatgt
ccatccatttatgggcatgagcttgttaaagcgggaataacactagcactgtttggaggt
gtaaggaagcattcaaaggataggaacaaggttcctgtcagaggagacattcatgtcata
gttgttggagatcctggcctaggcaagagccaactactgcaagcagcagctgcattatct
ccacgtggaatttatgtatgtggtaatgccactactaaagcaggtctcactgtagctgtt
gtgaaggatcccatgacaagcgactatgctttcgaggctggtgccatggtacttgcagac
agtggattgtgctgtattgatgagtttgacaaaatgtctgcagaacatcaggccctactg
gaagccatggaacaacagtgtgtctctattgcaaaggctggacttgtagcaagtttatca
gcacgaacttctatcttagcggcagcaaatcctgttggtggtcattacaaccgtgcaaaa
actgttaatgaaaatttgaagatgagtgctgctctgctttcacgatttgatttggtcttc
atattacttgataaaccagatgaacttctggataagcgagtctcagagcacataatgtcg
cttcattctggatatggagaacattcacctgcaacaaaaaagcgtagagatgaagcatcc
caaagcgctggaggcatagatatacatgcaaatggtggttctttagtgtctaggttgaga
cttgacccaaagaaagatagtgatttttttccagtacctgcacaacttcttcgcaaatat
attacttatgcacgaacatatgtttttcctagaatgtcaaagcctgcagcggaaatcctg
cagaagttttacttacaactcagaggccatgatgcatcagctgatggtacaccaataact
gcaaggcaactggaaagtctggtgaggctagcagaggctcgagctcggctagagttaaga
gaagaaataacagcccaagatgcactggatgtggttgaaataatgaaagaatccttgtat
gataagtatgttgatgaacatggctttgtggattttggtcggagtggggggatgagtcaa
cagaaagaagcaaaacggtttttaagtgctctcaataagcaatcagaactggaccagaaa
gattgtttttctatttctgaaatttacggtttggcggataggattggcctgagagttcct
gatattgacacatttgtggataatttaaacagtgttggctatctactcaagaaggggcca
aagatgtatcaggtgctgtcctcatcttattcatgcagccaatcatcaaggttgaggagc
taa
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