KEGG   Carya illinoinensis (pecan): 122277807
Entry
122277807         CDS       T08745                                 
Name
(RefSeq) exonuclease 1 isoform X1
  KO
K10746  exonuclease 1 [EC:3.1.-.-]
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    122277807
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cill03032]
    122277807
   03400 DNA repair and recombination proteins [BR:cill03400]
    122277807
DNA replication proteins [BR:cill03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    122277807
DNA repair and recombination proteins [BR:cill03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     122277807
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2 TPR_1 5_3_exonuc MIT TPR_2 HHH_5 TPR_8
Other DBs
NCBI-GeneID: 122277807
NCBI-ProteinID: XP_042943911
LinkDB
Position
9:16818009..16827629
AA seq 694 aa
MGIQGLLPLLKSIMAPIHVKELEGCSVAVDTYSWLHKGALSCSRELCKGLPTTRHIEYCM
HRVNLLRHCGVKPILVFDGGLLPMKSEQENKRARVRKENLARGIEHESNGNSAAAYECYQ
KAVDISPLIAHELIQVLKQENVSYIVAPYEADAQMTFLAIGKQVEAVITEDSDLIPFGCP
RIIFKMDKFGQGVEFRYSMLQQNKELSFAGFTKQMLLEMCILSGCDYLQSLPGMGLKRAH
ALIKKFKSYDKVIKHLRYSTVSVPPLYEESFKKAILTFQHQRVYDPVNEDIVHLSDISDN
SRDDLDFLGPLIAKHTAKGIAEGNLDPFTKTPIQGENVTAPMVLVRTSQHKQFNPERAGK
KLDLPVQKNLLTKYFCFASLEAKRKFRAPRTSPNHPSPDDDSSFIPEENVIEEAAVCKMD
CLPESPLDSKNTGTALPANYPVEDSFATKIPAHSGSPTHDISPETRSPDQTLLKQPRYSI
HKPCTALQKERECKNVLDAVEGKTRTETRKVVIRSSYFQHKSENQAKPNNEQQKAKNDGV
VDIHKNSIPEDYSFRNNHVMDMVRKRKSSLNDCIKKEDVQPKHRRGDASLTENGHHAPEL
SATSSETVAEEKFGSNISHLSRYSEIAEKSIESFVSVISSFRYTSSGSRASGLRAPLKDV
RNTRTNRPAAAGMDFSQFEYVPNKQKAGLASRRD
NT seq 2085 nt   +upstreamnt  +downstreamnt
atggggattcaggggcttttaccgctactgaagtcgatcatggccccaatccatgtcaag
gaattggagggctgttctgttgcggtcgacacctattcttggctacacaagggcgccttg
tcttgcagcagagagctctgcaaaggactacccaccaccaggcacattgaatattgcatg
catagagtgaatctgctccggcattgtggcgttaaacctattcttgtatttgatggaggt
cttctgccaatgaagagtgaacaagagaacaagcgtgccagggtgaggaaggaaaatctt
gcacgtggtattgagcatgagtcaaatggaaattctgctgctgcttatgagtgctaccag
aaagctgtcgatatttcacctttgattgcgcatgaactaatccaggtgttaaaacaggag
aatgtgtcttacattgtggctccttatgaggcagatgctcaaatgaccttcttggccatt
ggcaaacaggttgaagcagttattactgaggactcagatcttataccatttggttgtcct
agaatcatctttaagatggacaagtttgggcaaggtgttgaatttcgatattccatgcta
cagcagaacaaggagctcagttttgctggtttcactaagcagatgcttctagagatgtgt
attctgagtggatgcgactacctgcagtcattaccaggaatgggcctgaaaagggctcat
gcattaatcaagaagttcaaaagttacgacaaggtaattaaacacttgaggtacagcact
gtttctgtccctccattatatgaagaatcattcaagaaagcaatattgactttccagcat
cagcgggtatatgatcctgtcaatgaagatattgttcatttgtctgacatatctgataac
agcagggatgatttggacttcctaggcccattaatagcgaaacatacagccaaaggcatc
gcagaaggcaatcttgatccatttacgaaaactccaattcagggagagaatgttactgct
cccatggtgcttgtaagaacttcccaacataaacaattcaatcctgaaagagcaggaaaa
aagctagatttgccagttcagaagaatcttttaaccaagtatttctgctttgcatccctt
gaagcaaagagaaaattcagagctcctcggacgtcacctaatcacccaagtccagatgat
gactcttcttttattcccgaggaaaatgtcattgaggaagctgctgtatgtaaaatggac
tgcttgccagaatccccgcttgactccaaaaacacagggactgcccttcctgcaaactat
cctgtagaagatagttttgccactaaaattccagcgcattcaggatctccaacccatgac
ataagccctgagacaagaagtccagaccaaactctactaaaacaacccaggtattcaatt
cataaaccttgtacagcattgcagaaggagcgtgagtgtaagaatgttctagatgcagtt
gagggcaaaacaagaacagagacaaggaaggttgtgataaggagttcttactttcagcat
aagtcagaaaaccaggcgaaaccaaataatgagcaacagaaggcaaagaatgatggtgtt
gttgatatacacaagaatagcatacccgaggattattctttcagaaataaccatgttatg
gatatggttaggaaaaggaagagctccttaaatgactgcattaaaaaagaagatgtgcaa
cccaagcacaggcgtggagatgcatcccttactgaaaatggtcaccatgctcctgaactc
agtgcaacatcttcagagacagtagctgaagaaaagtttggatccaacatttcccattta
agccgatattctgaaatagctgagaaatcaatagaaagttttgtttcagtaatatcgtca
tttagatacacttcatctggttctcgagcaagtggtctccgtgctcctctaaaagatgtt
cgaaatactcgtaccaataggcctgctgctgctggcatggactttagccaatttgaatat
gtaccaaataagcagaaggctggcttagcatctcgtagagactga

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