Carya illinoinensis (pecan): 122278080
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Entry
122278080 CDS
T08745
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00040
Pentose and glucuronate interconversions
cill01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122278080
Enzymes [BR:
cill01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122278080
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
122278080
NCBI-ProteinID:
XP_042944097
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Position
10:28754682..28758408
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AA seq
480 aa
AA seq
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MLRRSCIVLISLLCSFAPLGKAVLNLTLPGQHPNPQAVVQEVHWKVNASMTRREMLQVSE
KDQDYSSCLTGNPIDDCWKCDPEWPNNRQRLADCGIGFGQYALGGKNGDFYIVTDSSDDD
PVNPRPGTLRYAVIQVEPLWIVFPSNMLIKLSQELIFNSFKTLDGRGANVHIVGGGCITL
QYISNVIIHNIHIHHCHPSGETNVRSSPTHFGWRTKSDGDGISIFGSKDIWIDHCSLSHC
KDGLIDAVMGSTGITISNNYFSHHDEVMLLGHSDDYLPDSGMQVTIAFNHFGEKLVQRMP
RCRRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPSDHNAKQVTKRVNTGEGEWR
GWNWRSEGDIMVNGAFFVASGEGVEVKYEKAYSVEPKSAVLIDQLIMHAGVLGVGGRDNN
LGKWTTGGNEGGIGLETEPDYMDYMSGSSVSLMSPSTSTLVSLLIAFSCLLFYKTPLAFM
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgaaggagctgcattgtcttgatctctcttctctgctcatttgctccactaggc
aaagctgtgctcaaccttactcttcccggccagcatcccaacccccaagctgttgtccaa
gaagttcactggaaggtaaatgcgtctatgacaagaagggaaatgctacaagtctcagag
aaagaccaggactactcctcatgcctaaccggaaaccccatagatgactgctggaaatgt
gacccagaatggcccaacaaccggcagagactagcagattgcggcattgggttcggacag
tacgctcttggcggcaagaacggagacttctacattgtcaccgactcctcggacgatgat
cctgtcaatcctaggccaggcacacttcgatatgccgtgattcaggttgaacctctgtgg
atcgtgttccctagcaacatgctcatcaagctctctcaagaacttatctttaacagcttt
aaaactctcgatgggcgcggggctaatgttcacattgtgggtggcggctgcattactctg
caatacatcagcaatgtcattattcacaacatacatatccaccattgtcatccctcaggt
gagacaaatgtgcggtcgagcccaacccacttcggttggcgcacgaaatcggacggtgat
gggatcagcatcttcgggtcgaaggacatatggatagaccactgttccctatcgcactgc
aaggatggcctgatcgatgcggtgatggggtcgacagggataacaatatcgaacaactat
ttctcgcatcacgacgaggtgatgctgctgggccacagcgacgactacttgccggactcg
ggaatgcaggtcaccattgcgttcaatcactttggggagaagttggtgcagaggatgccc
aggtgcaggcgcggctacatccacgttgttaacaacgatttcacgcagtgggaaatgtat
gccatcggtggtagcggtaaccctaccatcaatagccaaggcaaccgctacactgctcct
tccgatcacaatgccaagcaggtaacgaagcgagtgaacaccggagaaggggaatggagg
ggatggaattggagatctgaaggggatataatggtaaacggagcattctttgtggcgtcg
ggtgagggtgtcgaagtcaagtacgagaaggcttatagcgtggagccaaagtccgcagtg
ctcatcgaccaactcattatgcacgccggtgtactcggtgttggtggcagggacaacaac
ttgggaaagtggacaacaggaggcaacgagggtggaatcggtttagagacagagccagac
tacatggattatatgtctggaagcagcgtgtcactaatgtcaccctctacctctactctt
gtatcccttttgattgcattctcgtgcttgttattttataaaacacccctggcatttatg
tga
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