Carya illinoinensis (pecan): 122278256
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Entry
122278256 CDS
T08745
Name
(RefSeq) polygalacturonase-like isoform X1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00040
Pentose and glucuronate interconversions
cill01100
Metabolic pathways
Module
cill_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122278256
Enzymes [BR:
cill01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
122278256
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GFIT
Motif
Pfam:
Glyco_hydro_28
WD40_CDC20-Fz
MACPF_SNTX
Motif
Other DBs
NCBI-GeneID:
122278256
NCBI-ProteinID:
XP_042944348
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Position
10:3204516..3208958
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AA seq
559 aa
AA seq
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MSSTSHVNRTLHINNTYVINTKADHIVTGFSLQYIPSHNHLMILIEIIPCAQFGVSFLFH
TQVKGELIMGQQRHDHLLPFLFIMMMMMISFNNIISCYSSASQVLLEDDRRLLGPYHGPD
HHDHESHHGYDSQAYPSYNVMSTILNDEFKEDLIEEITNDVLSLKRIDHRVDSISSSVKT
VINVNDFGAQDEDGNHDDTEAFKKAWKVACSSSEGFVALVVPYKKYGLKPIRFSGPCKSV
LTMQIYGTIEASEDQSDYSDDRRHWLVIERVENLIVEGGGTIDGNGKIWWQNSCKINKTL
PCKHAPTAITFNQCTNLIVSNLKIQNAQQIHVSFSKCMNVLASYLIVTSPEKSPNTDGIH
VTRTQNILISSCVIRTGDDCISIVNGSQNVLATDIACGPGHGISIGSLGSGNSEAHVSGI
LVDRAQLSGTTNGVRIKTWQGGSGSASNIKFQNVEMDNVTNPIIIDQNYCDQDKACEEQD
SAVQVENVIYENIQGTSASDVAIKFDCSESFPCRGVLLQNINLEGSGGNEAEALCRNVEW
ADIGTVSPRCPEESHSCTI
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtacatcgcatgtgaatcggacattacatataaataacacgtatgtaataaat
acaaaagctgatcatatcgtgacgggcttctcacttcaatatataccaagccataaccat
ctcatgattctcatcgagataattccttgcgctcaatttggagtatccttcctcttccac
acacaagttaaaggcgaattaataatggggcaacaaagacatgatcatctgctcccattt
ttgtttattatgatgatgatgatgatctctttcaataatattatttcatgttatagcagc
gcttcgcaggtactactggaagatgatcgtcgcctgcttggtccttatcatggtcctgat
catcatgatcatgaatctcatcatgggtatgattctcaagcatatccttcgtataacgtc
atgagtaccattttgaacgacgagtttaaggaggacttgatcgaggaaataactaatgat
gtcctgagtttgaagaggattgatcatagggtggatagcatttcttcgtcggttaaaaca
gttattaatgtgaacgattttggagctcaagatgaagatggtaatcatgacgacacagag
gcatttaagaaggcttggaaggtagcgtgctcatcatctgaaggatttgttgctctggtg
gtgccttataaaaaatatggtcttaagccaatcagattctcaggtccttgcaaatctgtt
cttactatgcagatttatggaaccatagaagcatctgaggatcaatcagactacagcgac
gatcgcaggcactggttggtgattgagagagttgaaaatttaatagtcgaaggtggtgga
accatcgatggcaatgggaaaatatggtggcaaaactcatgcaaaatcaataaaactctg
ccttgcaagcatgcaccgacggcaataaccttcaaccaatgcacaaatttgattgtgagc
aacctgaagatccaaaacgcccaacaaattcatgtttctttttcaaaatgcatgaatgtt
ctagcttcctatctgattgtaacttctccagagaaaagccccaacacagatggaattcat
gttacacgtactcaaaacatcctcatatcaagctgtgttatacgaacaggtgatgattgt
atttctattgtaaatggatcccaaaatgtgctagccacggacatagcctgtggaccaggt
catggaatcagtatcggcagcttgggctcaggaaattcggaagctcatgtatcaggaata
ttggtggatcgagctcagctttctggaaccacaaatggagtgaggatcaagacatggcag
ggagggtcaggaagtgcaagcaacatcaaattccagaacgttgaaatggataatgtgact
aacccaataataatagaccaaaactactgtgaccaagacaaagcgtgcgaagaacaggac
tcagctgttcaagtagaaaatgtgatttatgagaacattcaagggacaagcgcttctgat
gtggccattaaattcgattgcagtgagagctttccatgtcggggagttttgttgcaaaat
attaacttggaaggtagtggagggaacgaagcagaagctctgtgccgtaacgtggaatgg
gctgacataggcactgtatccccacgctgccccgaagaaagccattcatgcacaatatga
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