Carya illinoinensis (pecan): 122278925
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Entry
122278925 CDS
T08745
Name
(RefSeq) serine/threonine-protein kinase rio2 isoform X1
KO
K07179
RIO kinase 2 [EC:
2.7.11.1
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122278925
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cill01001
]
122278925
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cill03009
]
122278925
Enzymes [BR:
cill01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
122278925
Protein kinases [BR:
cill01001
]
Serine/threonine kinases: Other
RIO family [OT]
122278925
Ribosome biogenesis [BR:
cill03009
]
Eukaryotic type
Pre-40S particles
Kinases
122278925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
Rio2_N
ABC1
APH
Kdo
OspG_kinase
TCAD9
Pkinase
Motif
Other DBs
NCBI-GeneID:
122278925
NCBI-ProteinID:
XP_042945069
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All DBs
Position
1:47672281..47679728
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AA seq
474 aa
AA seq
DB search
MKLDVNALRYLSKDDFRVLTAVEMGMRNHEIVPTELVARIASLKHGGAYKVLKNLLKHKL
LHHDSSKYDGFRLTYLGYDFLAIKTLLNRGVFVAVGRQIGVGKESDIFEVASEDGTVLAM
KLHRLGRVSFRAVKSKRDYLRHRTSYNWLYLSRLAALKEFAFMKALEEHSFPVPRAVDCN
RHCVIMSLVQGYPLVQVKQVQNPDMVFERIIGLVVRMAEHGLIHCDFNEFNIMIDDDEKV
TMIDFPQMVSVDHRNAQMYFDRDVECIFKFFRKRFNLSFEESPDENDGSEVDTDESGRPR
FSSIAKGVGFLDKELAASGFTRKDQEDIEKFIEGGIEKDADSGDEESEDDGHNSDSELNK
SYINGVDSLHLLDQQEQTIHCDEEARVEENQENSETGQSQTSVPECPDASDKEEENQTMN
INDAELTKRLRKQNRRVIASVRGGRKSLASRNSYKDKGGSSSRNSKIQKQMSDW
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggacgtgaacgccttgagatatctctctaaggatgatttcagagttctcact
gcggtcgaaatgggaatgcgcaatcatgaaattgtgcctacagaactcgtggcccgcata
gcctctctcaaacacgggggtgcttacaaagtcttgaagaatttgctaaagcataagctc
ttgcatcatgactcctccaaatatgatgggtttcggctcacctaccttggttatgatttt
cttgctattaagaccctgcttaaccgaggagtttttgtggctgttggtcgtcaaattggg
gttggaaaagagtctgatatctttgaggttgccagtgaagatggtacagtcctagcaatg
aagttgcacagactcggtagagtttcttttagagctgttaaatctaagcgtgactatttg
aggcatcgtactagttataattggctgtatctatctcggcttgccgctctcaaagagttt
gcttttatgaaggctttggaagaacacagttttcctgttccacgtgctgtggactgtaat
aggcattgtgtgattatgtcactcgtccaaggttaccctcttgtccaggtcaagcaagtg
caaaatccagatatggtttttgaaaggatcattggtcttgtggttcgtatggcagaacat
ggcctcattcactgtgacttcaacgaattcaatattatgatagatgatgatgagaaggtc
accatgattgattttccacaaatggtatctgtagaccatcgtaatgcgcagatgtacttt
gatcgtgatgttgaatgcatcttcaagttttttagaaagaggttcaacctatcttttgaa
gaaagcccagatgaaaatgatggttcagaggtagacacagatgaaagtggcaggcctcgc
ttttcttcaatagcaaaaggtgttggttttctagacaaggaacttgcagctagtggattt
actagaaaggatcaagaagacattgagaagttcattgaaggagggattgaaaaggatgcg
gattcaggcgatgaagaaagtgaggatgatggacacaattctgactctgagttaaataaa
tcttatatcaatggtgttgattctctgcacttgttagatcagcaagagcagacaattcac
tgtgatgaagaagccagagtagaggagaaccaagaaaattctgaaacaggtcaaagtcaa
accagcgtacctgaatgtccagatgcgagtgacaaggaggaagagaaccagactatgaat
attaatgatgctgaattgacgaagcgtttgagaaagcagaatcggcgtgtcatagcatca
gtgcgtggaggacgaaagagtcttgcctccagaaacagctacaaagacaagggtggcagt
tcttctcgaaattccaaaatccagaaacaaatgagcgactggtaa
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