Carya illinoinensis (pecan): 122279052
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Entry
122279052 CDS
T08745
Name
(RefSeq) protein FRIGIDA-ESSENTIAL 1-like isoform X1
KO
K27809
protein FRIGIDA-ESSENTIAL 1
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122279052
Transcription factors [BR:
cill03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
122279052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
122279052
NCBI-ProteinID:
XP_042945297
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Position
10:complement(5487186..5494463)
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AA seq
916 aa
AA seq
DB search
MPPSASAATRSDDDEDHGAPAEVSDADGYEKEEPEYEEVEEDGDVEEYEEYVEEVEEVEE
EEEEEEEVVEEVKEEEVEEEEEEEEEEEEEEVVVVVEVEGKKVDQKDEVDASDSSIEADE
DPNDVSQDMEFEGHDRQLRSSSYTLEKSEVKISSDYIAVEESNGNSKFSSHSNEPLTTQK
EELGLNYEDSKYKEMGKDMVSEDKVFKDCSESHCDSKVFSCTKDIIDVETHLLFSSTRND
MANAFPVKDHLGEEPNGVSNTREEIKQMDLQSGHDKNQMESRFFRLATADTRTRSLSPGA
EIKEGNKRPAVICDFFAQGWCIRGSSCRFLHIKDGLNNTTQKSKVEADALNWKKVQVDKG
LRDITERSRSPGFPEPQESSVGNTLEFSLHISSETILPRELEESQRWHQFHRKHKLPLVE
KEDLSSCSNPDSQHLPSSKDDPVSVSFKDVGGESQRENWPANNYGDHASSNSRGSSLVKN
NLLPEYGFSSSSSVLLSRNYHSEIFSSHSLQSQHVHSECNSPLRIHSLNSSSNTHLQSTG
MLPSHRTSSWRASSLPFSYSSFSTSSLGVQRLLNSEKECHASESSSLLLSYSPFSGSKSE
NLPLASVPLHCAEHKTKFSSNDWEPSVPFRPSIFIPPIGISSPDRQYDPLHDSIELPKIG
DQSFGVSLDSHGASIMDTLLQRKYGNPALTEMQGLECHNDTTSVSSHNKVYENVLEKHHH
GRGSLKTEAETVGTSAVDRKSGMMPKEGNPLGFSHVNDRRKRSKLDDCRPSSHQNDASRH
QDLKVGRGGQDNEMDVGHKTDGNIHGEPKALRHFRAALIDLVKELLKPNWRDGHLSKDAH
NMIVKKVVDKVLKTLQSHQVPTTLESKQYLSSSRPKIVKLVEVSVLILEKRKSVLVLEIN
NKIFYLQGYVEKYGKS
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgcctccctcggcctccgccgccacgcgctccgacgatgatgaggatcacggtgctccc
gctgaagtttcagatgccgatggctacgagaaagaagaaccggaatatgaagaagtggaa
gaagatggtgatgttgaagaatacgaagaatatgtagaagaagttgaagaggttgaagaa
gaagaagaagaagaagaagaagtagtagaggaagtgaaagaagaagaagtggaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagtagtagtagtagtggaagtggagggg
aaaaaggtggatcagaaggacgaggtggatgcgtcagattcttcaattgaagccgatgag
gatcctaacgatgttagtcaagatatggagtttgaggggcatgacaggcaactgagatcg
agttcttataccctagaaaaatctgaagtgaagatctcatctgactacattgctgtagag
gaaagtaatggtaattccaaattttctagtcattcaaatgagccattgacaacacaaaag
gaagaattgggtttgaactatgaggattcaaaatataaagaaatgggaaaagatatggtt
tcagaagacaaggtctttaaagattgtagtgaatcacattgtgatagcaaggtcttttcg
tgcactaaggacattatcgatgttgaaacccaccttctttttagcagcacaagaaatgat
atggctaatgctttccctgtgaaagatcacttaggtgaggagcccaatggtgtttcgaat
actagggaagaaattaagcaaatggacttgcaatcagggcatgacaagaatcaaatggaa
tcaaggtttttcagattggctactgcagatacaaggactagaagtctgtcccctggtgct
gagattaaggaaggaaacaaacgcccggctgttatttgtgacttttttgcacaagggtgg
tgcatcagaggtagttcatgtaggtttcttcatataaaagatggcttgaataataccacc
caaaagtccaaggtagaagcagatgctttgaattggaaaaaagttcaggtggacaaaggt
ttgagagacattacagagagatcaaggtcgcctggttttcctgagccacaggaatcttca
gttggaaataccctggaattttctttacacatctcttctgaaacaatcctgccaagggag
cttgaagaaagccaaaggtggcatcagtttcatcgaaaacataaacttccattggttgag
aaagaggacttatcttcgtgcagtaatcctgactcccagcatttgccttcgtctaaggac
gatccggtctctgtctcgtttaaggatgtagggggagagagtcagagagaaaattggcct
gctaataattatggtgaccatgcttcgtcaaacagtagaggtagttcgttagtgaagaac
aacttgcttcctgagtatggattttcttcaagtagctctgttcttttgtcacgcaattac
cacagtgagatcttctcttctcattctctacagagccagcatgtgcacagtgagtgtaat
tcaccacttaggatccattctctgaattcaagctcaaatactcatcttcagagtactggc
atgctgccatctcaccgtacctcttcctggagagcatcttcattgccctttagttattct
tctttcagtacaagttctcttggtgttcaaaggctgttgaacagtgagaaagaatgccat
gcttctgaatcatcttccttgctgcttagttattctcccttctctggttctaaatcagaa
aatctacctctagccagtgtaccattgcactgtgctgaacataaaacaaaattttcgtca
aatgattgggagccttctgtacctttccgaccatctatttttattcctcctattggtata
tcatctccagatcgccaatatgatcctcttcatgatagcattgagctacccaagattgga
gatcaatcctttggagtttctcttgacagtcatggggcatccatcatggacacattgctc
cagaggaaatatggtaatcctgcattaactgagatgcagggcctagaatgtcacaatgat
acaacttctgtatcttctcataataaagtttatgagaatgtgttagaaaaacaccatcat
ggaagaggttctcttaaaactgaagcagagacagttggaacttctgctgttgaccggaaa
agtgggatgatgcctaaagaagggaatcccttgggcttctctcatgtcaatgataggaga
aaacggagcaagctcgatgattgtcgtccttcaagtcatcaaaatgatgcatcaagacat
caggacttaaaagtaggtaggggcggacaagacaatgaaatggatgttgggcataagaca
gatggaaatattcacggtgaaccaaaagcactgagacattttcgtgctgccctaatagat
ttagttaaagagttgttgaaaccaaattggcgtgatggccatctcagcaaggatgcacat
aacatgatagtaaaaaaagtggtagacaaggttcttaaaaccttacaatcccaccaagtt
ccaactaccttggaatcgaagcaatatctctcttcatcacgtccaaaaattgttaaactt
gttgaggtgagtgtcttgattctagagaaaagaaaaagtgtcttggtcctggaaattaac
aataaaattttttacttgcagggatatgttgagaaatacggcaaatcttaa
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