Carya illinoinensis (pecan): 122279066
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Entry
122279066 CDS
T08745
Name
(RefSeq) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122279066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cill03400
]
122279066
DNA repair and recombination proteins [BR:
cill03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
122279066
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
SR_plectin_7
DNA_pol3_gamma3
Motif
Other DBs
NCBI-GeneID:
122279066
NCBI-ProteinID:
XP_042945319
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Position
10:4857287..4864347
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AA seq
912 aa
AA seq
DB search
MQLITNLPTSFIKPPILSPKALKPSFSLSNSRKSNSDRFALSQTLQSETLKILEWPSVCK
QLSSFTSTTMGSSVVQNVEIPIGQTWEESQKLLDQTAAAAAMMDSWTLDFSGIEDVSGIV
DSAVSGQLLTILELCAMRGTLRAAKRLCEKLEQLAASGDCSERYLPLLEILKDCNFQVEL
EHKIQFCIDCNLLIILDRASEDLEIIRSERKRNMGNLDSLLKEVSSRIFQAGAIDRPLIT
KRRSRMCVGVRASHRSLLPDGVVLDVSSSGATYFMEPKEAVELNNMEVRLSNSEKAEEIA
ILSLLTSEIAESEIEIKYLLDRILEVDLAFARAGYAQWMNGVCPIVTAGDCEAISSEADY
ALSVDIDGIQHPLLLELSLRKSSDPLESYSGNAIQLGDGNGKMISGSLSGVSTFPVPIDI
KIEGGKRVVVISGPNTGGKTASMKTLGLASLMSKAGMFLPAKNSPRLPWFNLILADIGDH
QSLEQNLSTFSGHITRICNILEAASKESLVLIDEIGSGTDPSEGVALSTSILQYLKDRVN
LAVVTTHYADLSLLKEKDSQFENAAMEFSPETLQPTYQILWGSTGDSNALSIAESIGFDL
NIIQQAQQWVERLKPENQQERKGVLYQSLVQERNKLEAQARRAASLHAEIMDLYHEIKNE
AEDLDRRETALRARETQRVQQDLKTAKSQLETVLQEFENQLRTTSADQFNSLIRKSESEI
ASVVAAHCPHDVLSVSETDTKSYTPKIGEQIFVKGLGGKLVTVVEAPEDDENILVQHGKI
KVRLKKSNIRSIASSKRNATTRSVRSKQQGRRSTELQGHPEVEKDEVVSYGPLVQTSKNS
VDLRGMRVEEASYHLDMAISASGPYSVLFVVHGMGTGAVKERALEILNNHPRVAKFAQES
PLNYGCTVAYIK
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgatcaccaaccttcctacctctttcataaaacccccaattctatcccccaaa
gccctcaaaccctctttctcgctctccaactcccgcaagtcaaactctgaccgattcgcc
ctctcccagaccctccaatccgaaaccctcaaaatcctagaatggccctcggtatgcaag
cagctctcctccttcacatcgaccaccatgggatcctcggtcgtccaaaatgtcgaaatc
cccatcggccaaacctgggaggagagccagaagctcctggatcagacggccgcggcggcg
gcaatgatggattcttggacgttggatttctctgggattgaggatgtctctgggattgtg
gattcagcggtttcgggtcagttgctcacgattttggagctctgcgcgatgcggggaacg
ctgcgtgcggccaagagattgtgcgagaagttggagcagttggctgcgagcggagattgc
tccgagaggtacttgcccctgcttgaaatactgaaggactgcaatttccaagtggagtta
gaacataaaatacagttttgcatagattgcaatctgttaatcatccttgatagagctagc
gaagatttggagatcattaggtcagaaaggaagaggaatatgggaaatttggattctctg
ttgaaggaagtgtcatctcggatttttcaggctggggcaattgacagacctctgataacc
aagcgtcggtcgaggatgtgtgttggtgttagggcttcccaccgatctttacttccagat
ggtgtagtattagatgttagtagttctggtgcaacatactttatggaacccaaagaggct
gtggagttgaacaatatggaagtgaggctttcaaactctgagaaagctgaggagatagca
attttgagcttgctcacatctgaaatagcagaatcggaaatagagatcaagtatttgttg
gatagaattttagaagttgatcttgcttttgcaagagctggctatgctcagtggatgaac
ggggtctgtccaattgtcactgcaggggattgtgaggccatttctagtgaagcagattat
gctttgtcggtagatattgatggtatacaacatcctctgctccttgagctctctctgaga
aaatcttcagatccccttgaatcttattctggcaatgcaattcagttgggtgatggaaat
ggaaaaatgatttctggaagtttgtcaggtgtatctactttccctgtgccaatagacatt
aaaattgaaggtggaaagagggtggttgtgatatctggaccaaatacaggagggaaaact
gcttcaatgaaaaccttgggcctggcatctcttatgtcaaaggcaggcatgttcttacct
gctaagaacagcccaagacttccatggttcaatctaattctagccgatattggagatcac
cagtctctggaacaaaatctctcaacttttagtggccacataacgcggatttgtaacatc
ttagaagcggcctcaaaagaatcgcttgtccttattgacgaaattggtagtggaactgat
ccttcagaaggtgtggccctttccactagcatcttgcagtacctcaaagaccgtgttaac
ttggctgttgtgaccactcattatgccgatttgagcctcctgaaagaaaaagatagtcaa
ttcgagaatgcagccatggaattttcaccagaaaccttacaacctacttatcaaattctc
tggggaagtactggtgattcaaatgcgttaagtattgctgaatcaattggttttgatcta
aatataattcagcaggctcaacagtgggtggagaggttaaagccagaaaatcaacaagag
cggaaaggcgtgttatatcagtcgcttgtacaggaaagaaacaaattggaggctcaagcc
agaagagcagcatctcttcatgcagaaattatggatttatatcacgagataaaaaatgag
gcagaagatcttgataggcgcgaaacagctctcagggcaagagaaactcagcgggtccaa
caagatttaaagactgcaaaatctcagctggaaacggtgttgcaggaatttgaaaatcaa
ctcagaactaccagtgctgatcaatttaattccctgattaggaaatcagaatcagaaatt
gcatctgttgttgcagctcactgtcctcatgatgttctctctgttagtgaaacggacacc
aaatcatatacaccaaaaattggagagcaaatctttgtcaagggactaggaggtaagtta
gttactgtagttgaagcacctgaggatgatgaaaatatcctagtacagcatggtaaaata
aaggtccgtctaaagaaaagcaacatcagatctattgcaagtagcaaaagaaatgcgaca
actcgttctgtccgaagtaaacagcagggccgccggagcacagagctgcagggtcatcca
gaggtcgaaaaggatgaggtggtttcttatggcccattggtgcagacatcaaagaactca
gtggatttacgtggtatgcgagtggaagaagcttcttaccaccttgacatggccatctct
gcaagcgggccgtattcagttctctttgtggttcatgggatgggcactggtgctgttaag
gagcgtgcacttgagatattaaacaaccatcctcgcgtggccaagtttgcacaggaaagt
ccactgaattatggttgtacagttgcatatataaagtaa
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