KEGG   Carya illinoinensis (pecan): 122279066
Entry
122279066         CDS       T08745                                 
Name
(RefSeq) endonuclease MutS2
  KO
K07456  DNA mismatch repair protein MutS2
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    122279066
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cill03400]
    122279066
DNA repair and recombination proteins [BR:cill03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     122279066
SSDB
Motif
Pfam: MutS_V Smr MSSS SR_plectin_7 DNA_pol3_gamma3
Other DBs
NCBI-GeneID: 122279066
NCBI-ProteinID: XP_042945319
LinkDB
Position
10:4857287..4864347
AA seq 912 aa
MQLITNLPTSFIKPPILSPKALKPSFSLSNSRKSNSDRFALSQTLQSETLKILEWPSVCK
QLSSFTSTTMGSSVVQNVEIPIGQTWEESQKLLDQTAAAAAMMDSWTLDFSGIEDVSGIV
DSAVSGQLLTILELCAMRGTLRAAKRLCEKLEQLAASGDCSERYLPLLEILKDCNFQVEL
EHKIQFCIDCNLLIILDRASEDLEIIRSERKRNMGNLDSLLKEVSSRIFQAGAIDRPLIT
KRRSRMCVGVRASHRSLLPDGVVLDVSSSGATYFMEPKEAVELNNMEVRLSNSEKAEEIA
ILSLLTSEIAESEIEIKYLLDRILEVDLAFARAGYAQWMNGVCPIVTAGDCEAISSEADY
ALSVDIDGIQHPLLLELSLRKSSDPLESYSGNAIQLGDGNGKMISGSLSGVSTFPVPIDI
KIEGGKRVVVISGPNTGGKTASMKTLGLASLMSKAGMFLPAKNSPRLPWFNLILADIGDH
QSLEQNLSTFSGHITRICNILEAASKESLVLIDEIGSGTDPSEGVALSTSILQYLKDRVN
LAVVTTHYADLSLLKEKDSQFENAAMEFSPETLQPTYQILWGSTGDSNALSIAESIGFDL
NIIQQAQQWVERLKPENQQERKGVLYQSLVQERNKLEAQARRAASLHAEIMDLYHEIKNE
AEDLDRRETALRARETQRVQQDLKTAKSQLETVLQEFENQLRTTSADQFNSLIRKSESEI
ASVVAAHCPHDVLSVSETDTKSYTPKIGEQIFVKGLGGKLVTVVEAPEDDENILVQHGKI
KVRLKKSNIRSIASSKRNATTRSVRSKQQGRRSTELQGHPEVEKDEVVSYGPLVQTSKNS
VDLRGMRVEEASYHLDMAISASGPYSVLFVVHGMGTGAVKERALEILNNHPRVAKFAQES
PLNYGCTVAYIK
NT seq 2739 nt   +upstreamnt  +downstreamnt
atgcaactgatcaccaaccttcctacctctttcataaaacccccaattctatcccccaaa
gccctcaaaccctctttctcgctctccaactcccgcaagtcaaactctgaccgattcgcc
ctctcccagaccctccaatccgaaaccctcaaaatcctagaatggccctcggtatgcaag
cagctctcctccttcacatcgaccaccatgggatcctcggtcgtccaaaatgtcgaaatc
cccatcggccaaacctgggaggagagccagaagctcctggatcagacggccgcggcggcg
gcaatgatggattcttggacgttggatttctctgggattgaggatgtctctgggattgtg
gattcagcggtttcgggtcagttgctcacgattttggagctctgcgcgatgcggggaacg
ctgcgtgcggccaagagattgtgcgagaagttggagcagttggctgcgagcggagattgc
tccgagaggtacttgcccctgcttgaaatactgaaggactgcaatttccaagtggagtta
gaacataaaatacagttttgcatagattgcaatctgttaatcatccttgatagagctagc
gaagatttggagatcattaggtcagaaaggaagaggaatatgggaaatttggattctctg
ttgaaggaagtgtcatctcggatttttcaggctggggcaattgacagacctctgataacc
aagcgtcggtcgaggatgtgtgttggtgttagggcttcccaccgatctttacttccagat
ggtgtagtattagatgttagtagttctggtgcaacatactttatggaacccaaagaggct
gtggagttgaacaatatggaagtgaggctttcaaactctgagaaagctgaggagatagca
attttgagcttgctcacatctgaaatagcagaatcggaaatagagatcaagtatttgttg
gatagaattttagaagttgatcttgcttttgcaagagctggctatgctcagtggatgaac
ggggtctgtccaattgtcactgcaggggattgtgaggccatttctagtgaagcagattat
gctttgtcggtagatattgatggtatacaacatcctctgctccttgagctctctctgaga
aaatcttcagatccccttgaatcttattctggcaatgcaattcagttgggtgatggaaat
ggaaaaatgatttctggaagtttgtcaggtgtatctactttccctgtgccaatagacatt
aaaattgaaggtggaaagagggtggttgtgatatctggaccaaatacaggagggaaaact
gcttcaatgaaaaccttgggcctggcatctcttatgtcaaaggcaggcatgttcttacct
gctaagaacagcccaagacttccatggttcaatctaattctagccgatattggagatcac
cagtctctggaacaaaatctctcaacttttagtggccacataacgcggatttgtaacatc
ttagaagcggcctcaaaagaatcgcttgtccttattgacgaaattggtagtggaactgat
ccttcagaaggtgtggccctttccactagcatcttgcagtacctcaaagaccgtgttaac
ttggctgttgtgaccactcattatgccgatttgagcctcctgaaagaaaaagatagtcaa
ttcgagaatgcagccatggaattttcaccagaaaccttacaacctacttatcaaattctc
tggggaagtactggtgattcaaatgcgttaagtattgctgaatcaattggttttgatcta
aatataattcagcaggctcaacagtgggtggagaggttaaagccagaaaatcaacaagag
cggaaaggcgtgttatatcagtcgcttgtacaggaaagaaacaaattggaggctcaagcc
agaagagcagcatctcttcatgcagaaattatggatttatatcacgagataaaaaatgag
gcagaagatcttgataggcgcgaaacagctctcagggcaagagaaactcagcgggtccaa
caagatttaaagactgcaaaatctcagctggaaacggtgttgcaggaatttgaaaatcaa
ctcagaactaccagtgctgatcaatttaattccctgattaggaaatcagaatcagaaatt
gcatctgttgttgcagctcactgtcctcatgatgttctctctgttagtgaaacggacacc
aaatcatatacaccaaaaattggagagcaaatctttgtcaagggactaggaggtaagtta
gttactgtagttgaagcacctgaggatgatgaaaatatcctagtacagcatggtaaaata
aaggtccgtctaaagaaaagcaacatcagatctattgcaagtagcaaaagaaatgcgaca
actcgttctgtccgaagtaaacagcagggccgccggagcacagagctgcagggtcatcca
gaggtcgaaaaggatgaggtggtttcttatggcccattggtgcagacatcaaagaactca
gtggatttacgtggtatgcgagtggaagaagcttcttaccaccttgacatggccatctct
gcaagcgggccgtattcagttctctttgtggttcatgggatgggcactggtgctgttaag
gagcgtgcacttgagatattaaacaaccatcctcgcgtggccaagtttgcacaggaaagt
ccactgaattatggttgtacagttgcatatataaagtaa

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