KEGG   Carya illinoinensis (pecan): 122279206
Entry
122279206         CDS       T08745                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122279206
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cill03019]
    122279206
   03041 Spliceosome [BR:cill03041]
    122279206
Messenger RNA biogenesis [BR:cill03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     122279206
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122279206
Spliceosome [BR:cill03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    122279206
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35
Other DBs
NCBI-GeneID: 122279206
NCBI-ProteinID: XP_042945567
LinkDB
Position
10:2731390..2736601
AA seq 334 aa
MEGMKKRKLGEAAGDEEIPSEEELRLLLDPLPKPQLVHLLSKLGSQYPSIAEEIRSIASA
DPVHRKLFVRGLAWNTTSETLCAAFLVHGEIEEGAVIFDKATGKSRGYGFITYKHMDSAH
SALRAQSKMIDGRLAVCNLACEGLSGASTTQDLAQRKLYIGGLSPDITSEKLLSFFGKYG
EIEEGSVAYDKDTNESRGFGFVTYKIVDAAKKAIDDPNKLLGGRNIIVKLADSHKGKSLQ
TQLPTAEVPMSFPMAAGYPQPGSAHASTTPVGYTYPQTVASYTASAYPSVPAPPALYPTQ
PQISYPPVALKEDSYGFPSTQVGIGGYPYYISKQ
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggagggcatgaagaagagaaagctgggagaagcagcgggtgacgaagaaataccatcg
gaagaagagctccgcttgctgcttgatcctctccctaaaccccagctcgtccatcttctc
tctaaactaggctcccaatatccttcaattgcagaagaaattagaagtattgccagtgca
gatcctgtacatcgaaagctttttgttcgtggcttggcctggaataccacttcagaaacc
ttgtgtgctgcatttctagtgcatggagaaatagaggaaggagctgtgatctttgacaaa
gcaacaggaaaatcgcgtggttatggcttcattacttacaaacatatggattcggctcac
agtgcattgagagcacagagtaaaatgattgatggccgattggctgtttgtaatcttgct
tgcgagggcttgagtggagcaagtacaacacaggatttagcccagaggaagctctacatt
gggggattgtcaccagatatcactagtgagaagctgctaagcttttttgggaaatatggt
gaaatagaagaaggttcagttgcatatgacaaagatacaaatgaatcacgtgggtttggc
tttgtgacatacaagatagtggatgctgcaaagaaggccatagatgatccaaataagctg
cttgggggaaggaatataatcgtgaagcttgccgattctcacaagggcaaatcactacag
acacagttacccacagcagaggtccctatgtcctttcctatggcagctggatatccacag
cctggaagtgcgcatgccagtactactcctgttggctacacttaccctcaaaccgttgca
tcatacactgcttctgcttaccctagtgttcctgcaccacctgctctgtacccgacccaa
cctcaaatttcctatccacctgtggctttaaaagaagactcctatggattcccatcaaca
caagtaggaattggcggctacccatattacatttccaaacaatga

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