KEGG   Carya illinoinensis (pecan): 122279210
Entry
122279210         CDS       T08745                                 
Name
(RefSeq) splicing factor U2af large subunit B-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122279210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cill03041]
    122279210
Spliceosome [BR:cill03041]
 Complex A
  U2 snRNP components
   U2 related factors
    122279210
 Complex B
    122279210
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded Transformer
Other DBs
NCBI-GeneID: 122279210
NCBI-ProteinID: XP_042945575
LinkDB
Position
10:complement(4820563..4834387)
AA seq 538 aa
MSDYASPENEGSEPGGLDARDSYQKHNSRGSDHERSRIRDKNQYREKDEDRHHRNYKDRS
SKDDNRGGKYDDYDRHQSGHYNRNHYSDRERERRHRRRSRSRSRDGSRNESRSHSRSRSH
SESKRTSGFDMAPPAASVLPGAAVPVQPPVVSQSMPGMIHNMLPFGTQLGALPLMPAQAM
TQQATRHARRVYVGGLPPLANEQTIATFFSQIMAAIGGNSAGQGDAVVNVYINHEKKFAF
VEMRTVEEASNAMALDGIIFEGVAVRVRRPTDYNPALAAALGPSQPSPHLNLAAAGLTPG
VIGGAEGPDRIFVGGLPYYFTEVQIRELLQTFGPLRGFDLVKDKDTGNSKGYGFCVYQDP
AVTDIACAALSGLKMGDKILTVRRATASAGQSKTEQEMILAQAQQHIAMQKMALLTGDVN
LPGVGMAPITNAETLTKVLCLTEAVTVDQLNDDQEYEEISEDMRDECSKFGTLVDITIPR
PSQNGEQIPGVGKVFLEYSDIAGCATARNALNGRKFGGNVVNAFYYPEDKYHIRDYGA
NT seq 1617 nt   +upstreamnt  +downstreamnt
atgtccgattacgcctcgcctgagaacgaaggatccgagcccggaggcctagatgcccgc
gactcgtatcagaagcacaattcacgtggatcagatcatgagagatcaaggatcagagat
aaaaatcagtatagggaaaaagatgaagatcgccatcacaggaactacaaggatagaagt
tcaaaagatgataacagaggtggcaagtatgatgattatgaccgccatcaaagtggccat
tataacagaaaccattattctgatcgagaaagagaaaggaggcatagacgtagatcgcgt
tcccgttccagggatggatctaggaatgaatctagatcgcactctcgttcccgttctcat
tcagaaagcaaaaggacaagtggttttgacatggcaccacccgctgcttctgtgctacct
ggtgcagctgttccagttcaaccaccagttgtttctcaatcaatgccaggaatgatacat
aacatgttaccttttgggacacagctgggagctcttcctctaatgccagcccaagccatg
acccagcaggctacaagacatgctcgacgagtatatgttggtgggcttccccccctggcc
aatgagcagacaattgcaactttctttagccaaatcatggctgcaattggtggaaattct
gctggtcaaggtgatgcagtagtcaatgtctacattaatcatgaaaagaagtttgcattt
gtggagatgagaactgttgaagaagcaagtaatgcaatggcattagatgggattatattt
gagggggttgctgtgagggtgcgaaggcctacagactacaaccctgcattagctgcagca
cttggtcctagccaaccaagtcctcaccttaacttagcggctgctgggcttacaccaggt
gtaattggtggagcagagggacctgaccgtatttttgttggtgggctaccatactacttt
actgaagtgcagattagggaattgctgcagacttttggacctcttcgtgggtttgatctt
gttaaggataaagacacaggaaactcaaaaggatatggtttctgcgtgtatcaggatcca
gctgtgacagacattgcttgtgctgctcttagtggattgaaaatgggtgataaaatccta
acagtcaggcgtgctactgcaagtgcggggcagtccaaaacagaacaggaaatgatctta
gcgcaggcacaacagcatatagctatgcaaaaaatggctttgttgactggtgacgtgaac
cttcctggagttgggatggcacctataacaaatgcagagactctgactaaagtcttatgt
ttgactgaggcggtaactgtggatcaactgaacgatgatcaagagtacgaagaaatatca
gaagacatgcgagatgaatgtagcaaatttggaactttggtggacataactattcctcgt
ccaagtcaaaacggagaacagataccaggtgttggaaaggtcttcttggaatattctgat
attgctggctgtgccactgcaaggaatgcacttaatgggaggaaatttggaggcaacgtg
gtgaatgccttctattatccagaagacaaatatcatatcagggactacggggcttaa

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