Carya illinoinensis (pecan): 122279246
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Entry
122279246 CDS
T08745
Name
(RefSeq) cyclin-T1-4-like
KO
K15188
cyclin T
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122279246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122279246
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
122279246
Brd4/P-TEFb complex
122279246
7SK RNP complex
122279246
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_N
CycT2-like_C
Cyclin_C
TFIIB
Cyclin_C_2
MRP-S34
Motif
Other DBs
NCBI-GeneID:
122279246
NCBI-ProteinID:
XP_042945645
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All DBs
Position
10:19102303..19117650
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AA seq
598 aa
AA seq
DB search
MAGILPGESSYHCTSDGGSSRNSQDRQEEVGRWYLSRKEIEEHSPSRMDGIDLKKETYLR
KSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRTIATVCMFLAGKVEETP
RPLKDVILVSYEIIHKKDPAAAQRIKQKEVYEQQKELILLGERVVLATLGFDLNVHHPYK
PLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSD
GEKVWWQEFDVTPRQLEEVSNQMLELYEQNRVPPSQGSEMEGSVGSGLSHQAPAKPPYVN
EEQASKKISSYLALDHSSTDNHGMPARSTQYRSNENGSAEMGSVITEHMVDVETKDDQHF
DNFPLKENMREVPNRSKVGIERAGSEDQESNGGRNETAEPGEWRDEGVSRKSGSLVGRSV
DLRKGPLGQSPKEAIKIDKVKVKAALEKRRKSRGEITRKKDVMDEDDLIEKELEDGVELA
AEDEKNKRDRRQSWSKSENLDRGKDHEDVGVGNHLKGQLSRGSEGENAEEGEMLDDASPM
LSSRKRKAGSPRDRQLEGKKRHDYMPSYHHDYIDEGHRMSRVGYADRDHRRHSQENHL
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggctggaattctacctggggagtcatcatatcattgcacatctgatggtgggtcttca
agaaattctcaagacaggcaagaggaagtgggtcgttggtatctgtcaagaaaggaaatt
gaagaacattccccatcaagaatggatgggattgacctgaagaaagaaacatatttacgc
aagtcgtactgcacatttttgcaggatttgggaatgaggctaaaagtgccccaggtaacc
attgccacagcaataatattttgtcatcggtttttccttcgtcaatcgcatgccaagaat
gacagaaggacaattgcaactgtgtgtatgttcctcgctgggaaggtagaagaaacccct
cgtccgctcaaggatgttattcttgtttcttatgagataatccacaaaaaagatcctgct
gcagcccagaggatcaaacagaaggaagtatatgaacaacaaaaagagctaattttattg
ggggaacgggttgtacttgccacgttgggttttgacctcaatgttcaccacccatataag
ccccttgttgaagcgataaagaaatttaaggttgctcagaatgcccttgcgcaagttgcg
tggaactttgttaatgacggtctgagaacatcactctgcctgcaattcaagccccatcac
attgcagcaggtgccattttccttgctgccaagttcctcaaagtgaagcttccatcggat
ggtgagaaggtctggtggcaagaatttgatgtcacccctcggcaattggaggaagttagt
aatcaaatgctggagctatatgagcagaacagagtgcccccatcgcaagggagtgaaatg
gaaggaagtgttggcagtgggctaagtcatcaggcccctgcaaaacctccatatgtgaat
gaggaacaggcttcgaagaaaatttcatcttatctagcgctggatcattcgtccactgac
aatcatggcatgccagcaagaagcacacaatatcgaagtaatgaaaatgggagtgcagag
atgggtagtgttattactgagcacatggtggatgtagaaactaaagacgatcagcatttt
gataattttcccttgaaggagaacatgagagaagtaccaaatagatccaaggtgggaata
gagagagctggtagtgaagaccaagaaagtaacggtgggagaaatgagactgcagaacca
ggagagtggagggatgagggtgtctcacgaaagtctggcagtttggttggtcgaagtgtg
gaccttcggaaaggcccccttggccagtcgcctaaagaagctataaagattgacaaggtc
aaggttaaggcagcacttgagaaaagaaggaagtctcgtggggaaataacaaggaagaaa
gatgtgatggatgaggatgatctcattgagaaagaacttgaagatggggtcgaattggca
gctgaggatgagaaaaacaaacgtgatagaaggcaaagctggtcaaaatctgagaattta
gatcgtgggaaggaccatgaggatgttggagttggaaaccacttgaaggggcaattgtcg
aggggatcagaaggagagaatgcagaagagggagagatgttggatgatgcttcacctatg
ttgagcagccgtaagagaaaagctggcagcccacgggacaggcagttggaggggaagaag
cggcatgactatatgccgagttatcaccacgactatatagatgaaggacataggatgagc
cgggttggttatgcagatagagaccacagaaggcattcccaggagaatcatttgtga
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