Carya illinoinensis (pecan): 122279253
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Entry
122279253 CDS
T08745
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122279253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122279253
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122279253
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
122279253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
122279253
NCBI-ProteinID:
XP_042945667
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Position
10:complement(2556430..2561539)
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AA seq
307 aa
AA seq
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MAPGSSACKEVVESYSTVSDYEIATTELETIGKPTRATNGSGGQQGIYSTNGVHELLECP
VCTCLMYPPIHQCPNGHTLCSNCKTRVHNCCPTCRYDLGNIRCLALEKVAESLELPCTYQ
TLGCTDIFPYYSKLKHEQHCRFRPFSCPYAGSECSVTGDIPTLVAHLKDDHKVDMHDGCT
FNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGDDNEAKK
FSYSLEVGANGRKLIWQGIPRSIRDSHKKVRDSQDGLIIQRNMALYFSGGDRQELKLRVT
GRIWKEE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggctcctggtagtagcgcttgcaaagaagtcgttgagtcttattctacagtttcagat
tatgaaatagcaacaacagagctggagactattggtaaacctacaagagctaccaatggt
tctggtggacagcaggggatttattcaactaatggtgtgcatgaactgcttgagtgcccc
gtctgcacatgtttgatgtaccctccgattcaccagtgtccaaatggccatactctgtgt
tcaaactgcaagacaagagtgcacaattgttgcccaacttgccgctacgatcttgggaat
ataagatgtttggctctggagaaagttgctgaatcgttggagctcccatgtacataccag
actttgggttgcactgatattttcccatactacagcaagcttaagcatgagcaacattgt
cgattccgtccattcagttgcccttatgctggatctgagtgctctgtcacaggtgacatc
ccaactcttgttgcacatcttaaggatgatcacaaggttgacatgcatgatgggtgtacc
ttcaaccatcgatatgttaaatcaaacccacatgaagttgaaaatgccacatggatgttg
actgtgttcaactgttttggaagacaattctgtttgcattttgaggctttccagcttggt
acggcaccagtatacatggccttcttgcgattcatgggcgatgacaatgaggcaaagaaa
ttcagctatagtttggaagttggtgcaaatggtcgtaagctcatatggcaaggaatacca
agaagcattcgtgacagtcataagaaagttcgtgacagtcaggacggactcattattcag
aggaatatggctctatacttttctggtggggataggcaagagctgaagttgagggttact
ggccgtatatggaaagaagaataa
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