KEGG   Carya illinoinensis (pecan): 122279403
Entry
122279403         CDS       T08745                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122279403
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cill03041]
    122279403
Spliceosome [BR:cill03041]
 Complex A
  U2 snRNP components
   U2 related factors
    122279403
 Complex B
    122279403
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus PCF11_charged zf-CCCH_4
Other DBs
NCBI-GeneID: 122279403
NCBI-ProteinID: XP_042945979
LinkDB
Position
10:523582..526928
AA seq 330 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPTISPTLCLSNMYQRPDMLTN
PAPQAQPNPNLDPAHIQEHFDDFYQDLFDELSKYGHIESLNICDNLADHMVGNVYVQFRE
EEDAANALRNLTGRFYSGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISK
DLRRKLFGRNRRRRSRSRSRSRSPARYRGYEEHPRGGRGFGRGGGRGYGRRDEDRDFRYH
DRGGRRPRSRSPGRRGERSGSPGGRRNRSPVRESSAERRAKIEQWNREREQVDSGPKNNE
GRIDDDRNGFAQNSDEYNDPEQQQRGQYDY
NT seq 993 nt   +upstreamnt  +downstreamnt
atggcggaacacttggcttcgatattcgggactgagaaggacagggtgaattgccccttc
tacttcaagatcggggcttgcaggcacggcgaccggtgctccaggctccacaccaagcca
accatcagccctaccctctgcctctccaacatgtaccagcgccccgacatgctcaccaac
cctgccccacaggctcagcccaaccccaacctcgaccccgctcacatccaagagcacttc
gatgatttttaccaggacctgtttgacgagctctccaagtacggccacatcgagagcttg
aacatctgcgacaatttggccgatcacatggtgggcaatgtgtacgttcagtttagagag
gaagaagacgccgccaacgcacttcggaatttgaccggaaggttttactcagggcgcccc
attattgtggacttctctccggtcacagattttcgtgaagctacatgtagacagtacgag
gaaaatgtttgcaatcgtgggggctactgcaacttcatgcatctgaagaaaattagcaag
gatctgaggaggaaattgtttgggagaaacagacgacggcgtagccgcagtcgaagcagg
agtcgcagtcctgctaggtaccgtggttatgaggaacatcctcgtggcggtcgtggtttt
ggtagaggtggcggtcgtggttatggtagaagagacgaagacagagatttccgctaccat
gatagggggggcaggaggcctagaagccgcagtcctggacgtagaggggaacggagtgga
agccctgggggaaggaggaataggagtccggtcagggaaagtagtgctgaaagaagagct
aagattgagcagtggaatagggaaagggaacaggtggactctggtccgaagaacaatgaa
ggaagaattgacgatgacaggaatggctttgcacagaacagtgatgagtataatgaccct
gagcagcagcagcgtggccaatacgattattag

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