Carya illinoinensis (pecan): 122279425
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Entry
122279425 CDS
T08745
Name
(RefSeq) transcription initiation factor IIB-2
KO
K03124
transcription initiation factor TFIIB
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122279425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122279425
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
122279425
Prokaryotic type
Archaeal type
TFB
122279425
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
Zn_ribbon_8
WHD_GDS1
Motif
Other DBs
NCBI-GeneID:
122279425
NCBI-ProteinID:
XP_042946017
LinkDB
All DBs
Position
10:3407065..3412687
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AA seq
312 aa
AA seq
DB search
MSDAYCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
GPTNPLLADGGLSTVIAKPNGATGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQLGLENGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVTKSEEF
DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY
AKEEDLKNLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgcgtattgctcagactgcaagaggcagacggaggtggtgttcgaccactct
gcgggggataccgtgtgctccgagtgcggccttgttctcgagtcccactccatcgacgag
acctccgagtggcgaactttcgccaacgaatcgggcgataacgatcccgtccgtgtcggc
ggtcccaccaaccccctcttggccgacggtggcctttccaccgtcatagccaagcccaac
ggtgctaccggtgagttcctctcgtcctcacttggccgctggcagaaccgcggctccaat
cccgatcgggggctaatcctcgccttcaagaccatcgccactatgtctgataggttgggc
cttgttgcaaccattaaggaccgggcaaatgagatatataagagggtggaagatcagaag
tctagtagaggaagaaatcaggatgcactattggctgcttgcctgtacattgcttgtcga
caagaagataagccacgcactgtaaaggaaatttgctctgtcgccaatggagccacaaag
aaggaaattggccgagcaaaagaatacatagtgaaacaactggggttggagaatggccag
tcggtggaaatgggaacaattcatgctggggacttcatgagacgattttgttccaatctt
ggtatgaataatcaagcggttaaagctgcccaagaagctgttacaaagtcagaagagttt
gatataaggaggagccctatatcaattgcagcagcagtcatttacattatcacccagctt
tcagatgataagaaacctcttaaagatatctcagttgctactggagttgcagaagggaca
ataaggaattcctacaaggatctttatcctcatgtatcaaagataattccaggctggtat
gccaaggaggaggatctcaagaacctttgcagcccttga
DBGET
integrated database retrieval system
