KEGG   Carya illinoinensis (pecan): 122279556
Entry
122279556         CDS       T08745                                 
Name
(RefSeq) target of rapamycin complex subunit LST8-1 isoform X1
  KO
K08266  target of rapamycin complex subunit LST8
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:cill00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    122279556
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cill04131]
    122279556
Membrane trafficking [BR:cill04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    122279556
   mTORC2 complex
    122279556
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_Nup120_160 Beta-prop_HPS5 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_Vps41 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_IFT140_2nd PROPPIN Beta-prop_WDR19_1st Beta-prop_NWD2_C Beta-prop_SPT8 Nucleoporin_N Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_NUP159_NUP214 Beta-prop_VPS8 Mala_s_1-like CFAP43_N Beta-prop_WDR35_TULP_N Beta-prop_WDR19_2nd Beta-prop_WDR35_2nd
Other DBs
NCBI-GeneID: 122279556
NCBI-ProteinID: XP_042946187
LinkDB
Position
10:3043307..3047596
AA seq 320 aa
MTQPSVILATASYDHTIRFWEAKSGRCYRTIQYPDSHVNRLEITPDKRYLAAAGNPHIRL
FDVNSSSPQPVMSYDSHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPGCQREYESRA
AVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAA
NNHGTCYVWRLLRGTQTMTNFEPLHKLQAHKGYILKCLLSPEFCEPQSAFSRYLATASSD
HTVRIWNVDGFTLEKTLTGHQRWVWDCVFSVDGAYLITASSDTTARLWSMSTGEDIRVYQ
GHHKATVCCALHDGAEPSPS
NT seq 963 nt   +upstreamnt  +downstreamnt
atgacccaaccgtctgtgatacttgcaacggcgagctatgatcacacaattcggttttgg
gaggccaaaagcggccgttgctaccgtaccatccaatacccggattcgcatgtcaatcgg
cttgagataaccccagacaaacgctacctggctgcagctggtaatcctcacattcgattg
tttgatgtcaactctagcagccctcaaccagtgatgagctatgattcacatactaataat
gtgatggcagtggggtttcaatgcgatggaaattggatgtattcaggttctgaggatggc
acagtaaagatttgggatttgagggctccaggttgtcaaagggaatatgaaagccgagca
gctgtcaacactgttgtgctccacccaaaccagaccgaacttatatcaggagaccaaaat
gggaatattcgtgtgtgggatttaacggcaaattcatgcagctgcgaattggtgccagag
gtagatactgctgtacggtctctcactgtcatgtgggatgggagcttggtcgtcgctgca
aataatcatgggacatgttatgtttggcgcttattgcgagggacccagactatgacaaac
tttgagccacttcataagctgcaagcacacaagggatatatacttaagtgcctactttca
cctgagttctgtgaaccacagagtgcattttctagatatctggcaactgcatcttctgac
catactgtcaggatatggaatgttgatggcttcacgttagagaaaactctaacaggacat
caaagatgggtctgggactgtgtgttctccgtagatggtgcctatcttataacagcttcc
tcggatacgacagcaagactttggtccatgtcaactggcgaagatatcagggtgtatcag
ggacatcacaaagcaactgtttgctgtgccctacatgatggagctgaaccctcaccctcg
taa

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