Carya illinoinensis (pecan): 122279643
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Entry
122279643 CDS
T08745
Name
(RefSeq) pleiotropic drug resistance protein 2-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122279643
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cill02000
]
122279643
Transporters [BR:
cill02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
122279643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_16
AAA_29
Rad17
AAA
RsgA_GTPase
AAA_22
AAA_25
AAA_30
AAA_23
SMC_N
AAA_18
AAA_33
nSTAND3
AAA_28
Zeta_toxin
NACHT
AAA_11
cobW
RuvB_N
ABC_ATPase
AAA_5
IstB_IS21
T2SSE
AAA_19
Motif
Other DBs
NCBI-GeneID:
122279643
NCBI-ProteinID:
XP_042946327
LinkDB
All DBs
Position
10:complement(715028..723853)
Genome browser
AA seq
1452 aa
AA seq
DB search
MASALAGDDLARSTSSRRSWKSASFREVWAPPPDVFNRSGRQESDEEELRWAAIERLPTY
DRLRKGMLRQVLDNGRVVQNEVDVAHLGIQDKKQLMESILKVAEDDNENFLRRLRDRTDR
VGIEIPRIEVRYEHLSVEGDVYVGSRSLPTLLNVTLNTIESILGLVHLAPSKKRKIQILQ
DVSGIVKPSRMTLLLGPPGAGKTTLLLALAGKLDKDLRESGRVTYCGHELNEFIPQRTCA
YISQHDLHHGEMTVRETLDFSGRCLGVGTRYEMLVELSRREKEAGIKPDPEIDAFMKATA
MSGQKTSLVTDYILKILGLDICADIMVGDEMRRGISGGQKKRVTTGEMLVGPAKALFMDE
ISTGLDSSTTFQICKFMRQMVHIMEVTMVISLLQPAPETFDLFDDIILLSEGQVVYQGPK
ENVLEFFEYMGFKCPERKGVADFLQEVTSKKDQEQYWFKKNQPYRYISVPDFAQAFGSFH
IGQQLAADLSVPYDRSRTHPAALVTETYGISNWELFKACFSREWLLMKRNSFVYIFKTTQ
ITIMSIIAFTVFLRTEMPVGTVTNGGKFFGALFFSLINVMFNGMAELAMTVFRLPVFYKQ
RDVLFYPAWAFGLPIWVLRIPLSFVESAIWIVLTYYTIGFAPSASRFFRQFLAFFGIHQM
ALSLFRFIAALGRTQVVANTLGTFTLLMVFVLGGFIVAKNDIEPWMIWGYYISPMMYGQN
AIVMNEFLDERWGAPNTDPHINATTVGRVLLKSRGFFTEDYWFWICIGALFGFSLLFNVL
FIAALTFLNPLGDSKAVVVGEDNSRKNNNTSARQHRTEGIDMAVRGSSEIIGASDDAQRR
GMVLPFQPLSIAFNHVNYHVDMPAEMKTQGVEEDRLQLLRDVSGAFRPGILTALVGVSGA
GKTTLMDVLAGRKTGGYIEGTITISGYPKNQSTFARVSGYCEQNDIHSPHVTVYESLLYS
AWLRLSSDVKTQTRKMFVEEVMELVELKPLRDALVGLPGVDGLSTEQRKRLTIAVELVAN
PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGG
QVIYAGPLGRHSHQLVEYFEAVPGVTKIKDGYNPATWMLEVSAPAVEAQLDVDFAEVYAN
SSLYQRNQELIKKLSTPTQGSKDLYFPTEYSQPFPVQCKACFWKQHWSYWRNPQYNAIRF
FMTIVIGALFGLIFWNKGGKMAKQQDLMNLLGAMYAAVLFLGATNASSVQSIVAIERTVF
YRERAAGMYSPLPYAFAQVSVEAIYVAVQTIAYTLLLYSMIGFEWKANKFLWFYYYIFMC
FVYFTLYGMMIVALTPGHQIAAICMSFFLSFWNLFSGFLIPRPLIPIWWRWYYWASPVAW
TLYGLVTSQVGDKDSVLEVPGVGEVPLKLFLKQSLGFDYNFLPAVAVAHLGWVLLFFSVF
AYGIKFLNFQRR
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggctttggctggagacgatctcgcccggtcaacgagcagccggaggagctgg
aaatcggccagcttccgggaggtgtgggccccgccgccggacgtgttcaaccggagcggg
aggcaggagagtgacgaggaggagcttcgatgggccgccattgagcggctaccgacctac
gatcggctaaggaaggggatgctcaggcaggtccttgacaatggcagagttgtgcagaat
gaggtggacgtcgcccatcttgggatccaggacaagaagcagttaatggagagcatactc
aaggttgcggaggacgacaacgagaatttccttaggagactcagggacaggactgacagg
gtggggattgagattcctagaattgaagttcggtatgagcatttatcggtggagggggat
gtgtatgttggaagccgatcgcttcccactcttcttaatgtcaccttgaacacaattgag
agtatcctcgggttagttcacctcgctccatccaagaaaagaaaaattcagatacttcag
gatgttagtggaatcgtcaaaccatcaaggatgactctacttctgggtcctccaggcgca
gggaaaacaacattgttgcttgcacttgctgggaaacttgacaaggatctaagggaatct
gggagagtcacctactgtggtcatgaattgaatgaatttattccacaaaggacttgtgcg
tatatcagtcagcacgatctacaccatggagaaatgacggtgagagagacactggatttc
tctggacgttgtctaggggttggcacaagatatgaaatgttggtagaactctcaagaaga
gagaaagaagcgggaattaaaccagatcctgagatcgatgcattcatgaaggccacagct
atgtcaggccaaaaaactagtttggtaacggattatattcttaagatacttggattggat
atctgtgccgatattatggttggagatgagatgaggagaggtatctcaggtgggcagaag
aagcgtgtgacaaccggggagatgttggttggaccagcaaaggctctttttatggatgaa
atatcgacggggttagacagttctaccactttccagatatgcaagttcatgaggcaaatg
gttcacattatggaagtgaccatggttatttctcttctacagccagcaccagagacattt
gatctttttgatgatatcatccttctttcagaaggtcaggtagtctaccaaggtccaaaa
gaaaatgtccttgaattctttgagtacatgggattcaaatgcccagaaaggaaaggggtc
gctgacttcttgcaagaagtaacgtccaagaaggatcaagaacaatattggttcaagaag
aaccaaccttacagatacatctcagttcctgattttgcgcaagcctttggctctttccac
attggccaacagcttgcagctgatcttagtgttccgtatgacagatctagaacccaccca
gctgcattggtcacagagacatatggtatttcaaactgggaactattcaaggcttgcttt
tcaagggagtggctgctaatgaagcgtaattcttttgtgtacatattcaagactacccag
ataacaatcatgtccataattgcctttacagtgtttcttaggacagaaatgccagtggga
actgtaacaaatggaggaaagttttttggagcactgttcttcagtctaattaacgtgatg
ttcaatgggatggcagagctggcaatgactgttttcagacttcctgtcttctataaacag
agggatgttttgttctatcctgcatgggcttttggcttacccatttgggttctcaggatc
cctctatcgttcgtggaatcagcaatatggattgttcttacatactatacaattggattt
gctccgtctgctagcaggttcttccgacagttcttggcattctttggcatacatcaaatg
gcattgtccctctttcggttcattgctgcacttgggagaacacaagttgttgcaaataca
ctgggcaccttcaccttgctgatggtttttgtgcttggagggttcattgttgccaaaaat
gacattgagccatggatgatatggggctattatatttctcctatgatgtatggacagaat
gccatagttatgaatgagtttcttgatgaaagatggggtgcacccaatacagacccccat
atcaatgctactaccgttggacgagtcctgctcaagtccagaggcttctttactgaggac
tattggttttggatttgtatcggagcactttttggattttctcttctcttcaacgtgtta
tttattgcagcattgactttcctaaatcctttgggtgattcaaaagctgtcgtcgtgggt
gaagataatagcaggaagaataacaacacatctgctagacagcatagaacagaaggtatt
gatatggctgtgagaggctcttcagaaattattggtgcttcagatgatgcccaaagaaga
ggaatggttttacccttccaacccctttcaattgcatttaaccatgtcaattaccacgtg
gatatgcctgctgaaatgaagactcaaggggttgaagaagatcgtcttcaattgttacgg
gatgttagtggtgctttcagaccagggatattgacggcacttgtgggtgtcagtggtgct
gggaagacaacccttatggatgtgttagcaggaagaaagaccggtggctacattgaagga
accattaccatatctggttatcctaaaaaccaatcaacatttgcccgggtcagtggttac
tgtgaacagaatgacattcattcaccgcatgttactgtctacgaatctctcctatattca
gcttggcttcgtctctcttcagatgtaaagacacaaacaagaaagatgtttgtggaagaa
gttatggagttggttgagcttaaaccactaagagatgctctagtcggccttcctggagta
gatggtctttcaacagaacaaaggaagaggctaacaatagctgttgagctggttgctaat
ccttctatcatcttcatggatgaacccacatctggtctggatgccagagctgctgctatt
gttatgcgtacagtgagaaatacagttgatactgggagaactgttgtatgcacaatccac
cagcctagcatagacatttttgaagcttttgatgagctattgctaatgaaaagaggagga
caagtaatttatgctggacctctgggtcgccattctcaccagctagtagaatattttgag
gctgtcccaggggtcactaagatcaaggatggttataatcctgctacatggatgcttgaa
gtcagtgctcctgcagtcgaggctcaacttgatgtggattttgctgaagtttatgccaac
tcctcactttatcagaggaatcaggaactcatcaaaaagctaagcactccaacacaaggc
tctaaggacctctactttccaaccgaatactcccaacctttccctgttcagtgcaaagct
tgtttctggaaacaacattggtcttattggagaaatcctcagtacaatgccatccggttc
ttcatgacaatagtcattggtgcattatttggtctcatcttctggaacaaaggaggcaag
atggccaaacaacaagatctgatgaatcttttgggagccatgtatgctgctgtgcttttc
cttggagccaccaatgcttcttcggtgcagtcaattgttgccattgaaagaactgttttc
taccgtgaaagagcagctggaatgtattctccactgccttatgcatttgctcaggtctcc
gtagaggcaatttatgttgcagttcaaactattgcatacactcttcttctttactccatg
atcggatttgagtggaaggcaaacaaattcttgtggttctactactacatattcatgtgc
tttgtctacttcacactctatggaatgatgattgttgcactgacaccaggacatcaaatt
gctgcgatttgtatgtcattcttcctcagtttctggaacttgttctctggttttctcatt
cccaggccgctaatccctatttggtggaggtggtactactgggcttctccagtggcttgg
acactatatggccttgtgacctctcaagtgggtgacaaagactccgtccttgaggtacct
ggagttggtgaggtaccgttgaagctattccttaaacaaagcttgggttttgattataac
ttccttccagccgttgccgtggctcatcttggttgggttctcctcttcttctctgtattt
gcctacggcatcaagttcctcaacttccaaagaagataa
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