Carya illinoinensis (pecan): 122279867
Help
Entry
122279867 CDS
T08745
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122279867
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122279867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
CREPT
Motif
Other DBs
NCBI-GeneID:
122279867
NCBI-ProteinID:
XP_042946680
LinkDB
All DBs
Position
10:4506579..4528378
Genome browser
AA seq
569 aa
AA seq
DB search
MSNGEFDGLVLAEKLSKLNNSQQSIESLSRWCISHRKKAKQIVETWAKLFNSSQREQRVS
FLYLANDILQNSRRKGSEFVNEFWKALPAALRHVYENGDEYGKKAVTRLVDIWEERKVFG
SRGRSLKDEMLGKNPPPLSVSNGKSSNPIKIVKRDANSVRIKLAVGGLPEKILTAFQSVL
DEHSTEEAALSKCNATVHHVGKIEEDVECTLTQGNQLGSTVVDELHEQEDILKQCVGQLE
SAEATRATLISLLKEALQDQESKLEFIRSQLQVAQDRIVRASNIRNRLTSPTVPGPAATT
MNPATEGTRVAEQNLPSVQPTSTLPQPPLLQPVVSFAPLRTTEEENKKAAAAAVAAKLAA
STSSAQMLTSILSSLVAEEAASKNGSINSTAFTSALSMFPPEKRPKLEKPMPAPDVSSSD
VSSTTYFTPLQQQPMTNVASAPSSSLQPTSQANQMQGPFAALPPPPPPPPPPLSSATPAV
SQYVQSAGLVVMPYGYGANTLPPPPPLPPHVAMNLARPTTQPAGQGQPQPQQSQQQQQQQ
PATGGFYRPAGIGFYGQSHQPTPPPVPRQ
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacggcgaatttgacggactggttttggctgagaaattgtcgaaacttaacaat
tcgcagcaaagcattgaatctttgtctcgttggtgtatctctcatcggaagaaggcaaaa
cagattgtggaaacgtgggctaaattgttcaactcatctcagagggagcagcgtgtttct
tttctgtatttggctaatgatattttgcaaaatagtaggcggaaaggcagcgagtttgtg
aatgaattctggaaagctcttcctgcagctctcaggcatgtttatgaaaatggcgatgaa
tatggaaagaaagcagtaaccagactggttgacatatgggaagaaaggaaggtttttggt
tctcgagggcggagcctcaaagatgaaatgctgggcaagaatcctcctcccctgtctgtg
agtaatggaaagagttcaaatccaatcaagatagtgaagagagatgcaaactcagttaga
attaaattggctgttggaggtcttccggagaaaatattaactgcatttcaatctgttctt
gatgaacattctactgaagaagctgccttaagcaaatgtaatgccactgtacatcatgtg
ggtaaaattgaggaagatgttgaatgtaccttaacacaaggaaatcagctgggatctact
gtagtggatgagctgcacgaacaggaagatattcttaagcaatgtgttgggcaacttgag
agtgcagaggcaactagggctaccttgatttccctgcttaaagaagcacttcaggaccaa
gaatcaaagctggaatttattcgcagccagttgcaagttgctcaggatcgaattgtgcga
gcaagcaatattaggaacaggctgacatcacccactgttcctggccccgcagccactacc
atgaaccctgcaacagagggaacaagggttgcagaacagaatctgccttcagttcaaccg
accagtaccctgcctcagcctccacttttgcaacctgtggtttcttttgctcctcttaga
actactgaagaagagaacaagaaagcagcagctgctgctgttgctgctaaacttgctgcc
tctacatcctctgcacagatgcttacctctattctttcatccctcgttgcagaagaagct
gcctccaagaatggtagcataaattcaactgcatttacttcagcactatctatgttccct
ccagaaaaacggcccaaacttgagaaaccaatgcctgctcctgacgttagcagttccgat
gtcagcagcacaacctattttacccctctacaacagcaaccaatgaccaacgtggcatct
gcaccatcaagtagcttgcaacccacttcacaagccaaccagatgcaaggtccctttgct
gctctaccaccaccacctcctcctccaccaccacctttatcttctgcaactccggcagtg
agtcaatatgtccaatctgctggtctggttgtgatgccttacgggtatggagcaaatacc
ctaccccctccacctcctcttcctccacatgttgcgatgaatttggcaaggcctaccacc
cagcctgctggacagggacagcctcagcctcagcaatcacagcagcagcaacagcaacag
ccagccactggaggattttaccggccagcaggtatcggattctatgggcaaagtcatcaa
ccaacaccaccaccagtacctcgccagtga
DBGET
integrated database retrieval system
