Carya illinoinensis (pecan): 122279906
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Entry
122279906 CDS
T08745
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122279906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122279906
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122279906
mRNA degradation factors
5'-3' decay
Decapping complex
122279906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
122279906
NCBI-ProteinID:
XP_042946743
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All DBs
Position
10:1219087..1223491
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AA seq
369 aa
AA seq
DB search
MSQTGKLMPNLDQQSTKMLNLTVLQRMDPFIEEILITAAHVTFYEFNIESNQWSRKDVEG
SLFVVKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNASQEVNGIWFYNP
RECEDVANLFTRILNAYSKVPSKSKVSPSKSEFEELEAVPTMSVMEGPLEPSSTATDAPE
DSSFQGIFGAATNIGSGGLNLANSRPSSQPIYHSSATLPLSSHSPSVASSPAPTPQVPSL
SLLASSNPTPLQDTLDPIRSSNQVTNLLKPSSFFSPATSSSALMIPPISSSVPTAPLHPP
LNLQRPYGTPLLQPFPPPTPPLSLTPSSAPQIDGPFISRDKVRDALLMVVQDDQFIDMFY
KALVKVHHP
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagaccggaaaattgatgccgaatctcgaccagcagagcaccaaaatgctcaac
ctcaccgtgctccagagaatggatcccttcatcgaagagattttgatcaccgcggcgcat
gttacgttctacgagttcaatatcgagagcaaccaatggagtcgcaaagacgttgaagga
tctctttttgtcgttaagaggaacactcaaccgcggttccaattcattgtaatgaatcgg
cgaaacacagataacctagtggagaatctattgggagattttgagtatgaagttcaggtt
ccctacctgttgtaccggaatgcatcccaagaagttaatggtatttggttttacaatcca
cgggagtgtgaggatgttgcaaatctatttactaggattctcaatgcatattcgaaagtt
ccttcaaagtcaaaagtatctccaagcaaaagtgagtttgaggaacttgaagcagtccca
accatgtcggtgatggagggtcctctggagccatcatcaactgccactgatgctcccgaa
gattcttcctttcagggcatttttggtgcagctacaaatattggaagcggtggtttaaac
ctagctaactcaagaccttcttcacagcccatctatcattcttctgcaactctcccttta
tcgtctcactcgcctagtgttgcttcctctcctgcaccaactccacaagtaccatcactc
tctcttctggcttcatccaatccaacccccctccaagacacacttgatccaatcagaagc
agcaatcaagtcactaatcttctgaagccctcttcatttttttcacctgccacttcctca
tctgcattgatgatcccacctatttcttcatcagtgccaacagctcctctgcatcctccc
ctgaatttgcagcgcccatatggcactcctttgcttcagccctttccaccacccactcca
ccactgtctcttactcctagttctgcgcctcaaattgatggaccatttattagcagagat
aaagttcgtgatgccctactgatggttgttcaggacgatcaatttattgatatgttttac
aaagcattggtgaaggtgcaccatccatga
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