Carya illinoinensis (pecan): 122280029
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Entry
122280029 CDS
T08745
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122280029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122280029
03036 Chromosome and associated proteins [BR:
cill03036
]
122280029
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
122280029
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
122280029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
WDR55
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Ge1_WD40
Beta-prop_SCAP
eIF2A
Beta-prop_RIG_1st
Beta-prop_IFT122_1st
RMC1_N
Beta-prop_VPS8
CFAP43_N
YajC
Motif
Other DBs
NCBI-GeneID:
122280029
NCBI-ProteinID:
XP_042946917
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All DBs
Position
10:2177166..2180873
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AA seq
470 aa
AA seq
DB search
MLSPPPPPLSLSLSSVMDAGSVGSSYKSSSRCPLQEQFLQRKNNRENLDRFIPNRAAMDF
DYAHYMLTEARKGKENPAVSSPSRDAYRKKLAETFNMNRTRILAFKNKPPTTIDPIPQEL
LSSYNPQTKTTKPRRHIRQSCERTLDAPDIVDDFYLNLLDWGSSNVLAIALENTVYLWDA
SNGSTSELVTIDEESGPVTSVSWAPDGRHVAIGLNNSHVQLWDSTANKQLRTLRGGHRQR
VGSLAWNNHILTTGGMDGKIINNDVRVRSHIVEIYRGHQQEVCGLKWSASGQQLASGGND
NLLYIWDRSVAASNAPTQWLHRLEEHSAAVKALAWCPFQGNLLASGGGGGDHSIKFWNTH
TGACLNSVNTGSQVCALLWNKNERELLSSHGFSQNQLILWKYPSMVKMAELTGHTSRVLY
MAQSPDGCTVASAAGDETLRFWNVFGTPEVAKPAPKATNPEPFANVNRIR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgctttctcctcctcctcctcctctctctctctctctctctagcgttatggatgcagga
tctgtgggttcctcttacaagagctcctctcggtgccctcttcaagaacaattccttcag
agaaagaataatcgtgaaaatttggataggttcattcccaatcgcgcggctatggacttc
gattacgcccattacatgctcaccgaggcgaggaaaggcaaagagaacccggctgtgagc
tctccctccagagacgcctaccggaagaaacttgcggagaccttcaacatgaaccgaact
cggatattggctttcaagaacaagccccctacaacaatcgacccaatcccacaggagttg
ctttcatcgtataatcctcagaccaaaacaaccaagccccggcgacacattcgtcagagt
tgtgagaggacattggatgctccagatattgtggatgatttctatttaaatttactagac
tggggtagcagcaacgtcctcgccattgctctcgaaaacacagtgtacctctgggatgcc
tcaaatggctctacctcagaactcgtcacaattgacgaagaaagtggtcctgttacgagc
gtcagttgggctcctgatggccggcacgttgccattggcttaaacaattcccatgtccag
ctttgggattctactgctaataaacagttgaggacattgagaggtggtcacaggcaaaga
gtcggttcactggcctggaacaatcacatcctaacaacaggaggaatggatggtaaaata
atcaacaatgatgtgagggtgagatcccacatcgttgagatctacaggggacaccaacag
gaggtctgtggattaaaatggtctgcctcaggccagcaattggcgagtggaggaaacgat
aatcttctctatatatgggacagatctgtggccgcttccaatgcaccaacacagtggctt
cacaggcttgaggagcactcagctgctgtcaaggccctggcttggtgtccattccagggt
aatttgctagcctctggcggtggtgggggtgaccattcgattaagttctggaacacccac
acaggcgcgtgcttgaactcggttaacacaggttcgcaggtttgtgctttgctatggaac
aagaatgagcgagaattgcttagctctcatggcttttcccagaatcagctcattctttgg
aaatatccttcaatggtgaagatggcggagctcactggacatacctctagagttctttat
atggcacagagcccggatgggtgcacagtggcatctgcagcaggagacgaaactctgaga
ttttggaatgtgtttgggaccccagaagtggctaaacctgcacctaaagcgacaaaccca
gagccatttgctaacgtgaaccgtatccgttga
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