Carya illinoinensis (pecan): 122280083
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Entry
122280083 CDS
T08745
Name
(RefSeq) farnesyl pyrophosphate synthase 1-like
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00900
Terpenoid backbone biosynthesis
cill01100
Metabolic pathways
cill01110
Biosynthesis of secondary metabolites
Module
cill_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
122280083
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cill01006
]
122280083
Enzymes [BR:
cill01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
122280083
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
122280083
Prenyltransferases [BR:
cill01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
122280083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF5438
Motif
Other DBs
NCBI-GeneID:
122280083
NCBI-ProteinID:
XP_042946974
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All DBs
Position
10:10336502..10341111
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AA seq
342 aa
AA seq
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MADLKSNFLKVYSVLKSELLEDPAFEWTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYKL
LKEGKELTEDEFFLASALGWCIEWLQAYFLVLDDIMDSSHTRRGQPCWFRLPKVGLIATN
DGVLLRNHIPRILRNHFRNKRYYVDLLDLFNEVEFQTASGQMIDLITTIEGEKDLSKYTL
SLHRRIVQYKTAYYSFYLSVACALVMSGENLDKHTDVKNILVEMGVYFQVQDDYLDCFGD
PETIGKIGTDIEDFKCSWLVVKALELSNKEQKKILHENYGKPDPANVAKVKALYKELDLQ
GVFAEYESKSYEKLTASIEAHPSKAVQAVLKSFLGKIYKRQK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctgaagtcaaactttctgaaagtatactccgtcctgaaatcggagctcctt
gaagaccctgctttcgaatggaccgatgattctcggcaatgggttgagcggatgctggac
tacaacgtgcctggagggaagttaaacagggggttgtccgttattgacagctacaaactg
ctgaaagaaggaaaggaattaactgaagatgaatttttccttgctagtgctcttggttgg
tgtatcgaatggcttcaagcatattttcttgttcttgatgacattatggatagctctcac
acacggcgtggtcaaccttgctggttcagattgccaaaggttggtctgattgctacaaat
gatggggttcttcttcgaaaccatatacccaggattcttaggaatcacttcaggaacaaa
cgctactatgtcgatctgctcgatttgtttaacgaggtggaatttcagacagcttcagga
cagatgatagatttgattactacaattgaaggagaaaaagatctgtccaaatacactttg
tcacttcaccgccgcattgttcagtacaagactgcctattactcattttacctttcggtt
gcatgtgcattggttatgtcgggtgagaatctggacaagcatactgatgtaaagaatatt
cttgttgaaatgggggtctactttcaagtacaggatgattatttagattgctttggagat
cctgaaacaattggcaagatcggaacagacattgaagatttcaagtgttcttggttggtg
gtaaaagcattggagctaagcaacaaggaacaaaagaaaatactacatgagaactatggg
aaaccagacccagccaatgttgcaaaagtaaaggctctctacaaagaacttgatcttcag
ggtgtatttgctgagtatgagagcaagagctatgagaagttgacagcctctattgaagct
catccgagcaaagcagttcaggcagtgttgaagtcattcttgggtaaaatatacaagagg
caaaaatag
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