Carya illinoinensis (pecan): 122280115
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Entry
122280115 CDS
T08745
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00040
Pentose and glucuronate interconversions
cill01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122280115
Enzymes [BR:
cill01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122280115
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
122280115
NCBI-ProteinID:
XP_042947024
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Position
10:complement(8879637..8881236)
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AA seq
399 aa
AA seq
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MASLSPLLAVILLSSSLTYIAYSSTLEAADDTTPQPWISSPGNPKPTNNILDVIDSCWRT
KSNWAADRLALADCTVGFGKDAIGGKLGEIYVVTTPHDDPINPKPGTLRYGVIQDEPLWI
IFAKDMAIKLDNELLVNSYKTIDGRGAKVEIANGPCITVQNVSHVIIHGIGIHDCKPGKA
GLVRSSPTLVGDRQGSDGDAIAIFDSSHVWIDHCFLSRCADGLNDVIHASTAVTISNNYF
SQHDKVMLLGHNDKFSADRVMRVTVVFNRFGAGLIERMPRVRFGYAHVANNKYEEWLMYA
VGGSADPTIFSEGNYFMASSTPFAKQVTKREASGAWKNWKWRSSRDVFVNGAYFVPSGWG
SCSPVYTRTQSFDVAHGLMVPALTSDAGPLQSCVVGKAC
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcctccctatcccctctccttgcagtgatattgctttcatcttctctaacatacatt
gcttattcctccaccttggaagcggccgacgacactactccacaaccatggatatcttcc
cccggcaatcctaagcccaccaacaacattttggatgtaatagactcatgctggcgcacc
aaatcaaattgggcagccgatcgcctcgctttggctgattgcacggtcggctttggcaaa
gatgcaatcggaggaaaacttggggaaatatatgtcgtcaccaccccgcatgacgaccca
ataaaccctaaacccggcacacttcgatacggtgtcatccaagatgagccactttggatc
atttttgccaaggacatggcgattaaactcgacaacgagcttcttgtgaacagttacaag
accatagacgggagaggggctaaagtggagattgcaaacggaccatgcatcacggtgcaa
aacgttagccatgttattatacatgggattggcattcatgactgtaagccagggaaagct
ggccttgttaggagtagtccaacgcttgttggagatcgtcagggctcggatggagatgcc
attgctatttttgattcttcgcacgtctggatcgaccattgctttctttcccgttgcgcg
gacggcctcaatgatgtaatccatgcttcgactgctgtcaccatctccaacaactacttc
tcccagcatgataaagtcatgctgctgggacacaacgacaaatttagtgcagatagagtt
atgagagtcacagtagtctttaaccgttttggggctggccttattgagaggatgcccagg
gtaaggtttggctatgcccatgtcgccaacaacaagtatgaagagtggcttatgtatgct
gttggaggcagtgctgatccaaccatcttcagcgaaggaaactactttatggcttctagc
actccctttgccaaacaggttaccaagagagaggcaagtggtgcttggaagaactggaaa
tggaggtcatctagagatgtgtttgtcaatggtgcttatttcgttccatctgggtgggga
agttgctctccagtttacactcgaactcaatcatttgacgttgctcatggattaatggtc
cctgccctgacttctgatgctggtcctctgcagtcatgtgttgtgggtaaagcttgctaa
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