Carya illinoinensis (pecan): 122280406
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Entry
122280406 CDS
T08745
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00040
Pentose and glucuronate interconversions
cill01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122280406
Enzymes [BR:
cill01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122280406
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
122280406
NCBI-ProteinID:
XP_042947228
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Position
11:36876055..36879666
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AA seq
396 aa
AA seq
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MANLQGGNETAVLCWRFALVLVIVMFFAPTASVAKKTKIDSLKMNVIDRCWRWNPDWRRN
RPQLATCSVGYAGKMTNNIGKGLTRYVVTDPSDNPLKPKPGTLRYGVTMIRGKKWITFRR
NMRIQLEKPLLIGSFTAIDGRGVEVHIAGKACLMIYKASNIIIHGLRIHHCRSQAPSSVM
GPDSKVLPIGPVDGDAIRLVTASKVWLDHNTLYACEDGLLDVTRGSTDITISNNWFRDQD
KVVLLGHDDGYLRDKNMKVTLVYNHFGPNCNQRMPRIRHGYAHVVNNFYQGWMQYAIGGS
TNPSVKSQANLFIAPKAGNKEVTWRNGCGQGENAGSCKFYSVADAFENGASFDQSRGGGA
RPLYNREQVFPVADSRSVRSLTKSSGALRCTRRSRC
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggctaatttgcaaggaggaaacgagactgccgttctctgctggcgctttgcattggtt
cttgtcattgtcatgttcttcgctcctactgctagtgttgctaagaaaacgaagatcgat
agcttgaaaatgaacgtgattgatcggtgctggagatggaacccggattggagaaggaac
aggccgcaacttgcgacatgctcagtgggttatgcagggaagatgactaataatattggg
aagggcctcacaagatacgtggtaactgatccgagcgacaacccgttgaagcccaagccg
gggaccctaagatatggagtaaccatgatcagagggaaaaaatggatcacattccgaagg
aacatgcgcatccaacttgaaaaaccacttctcattggtagtttcacagccattgatggt
cgaggtgttgaagttcacattgcgggtaaggcatgcttgatgatctataaggcaagcaac
ataatcattcatggccttcggatccaccattgccggtcccaagcaccaagctcagtgatg
ggtccagactcaaaggtattgccaataggtccggtggatggagatgcaatcagattggtt
acagcatcaaaggtgtggctagaccataacacactgtatgcgtgcgaggacggtctcctg
gatgtgacacgaggttccacagatataacaatctccaataactggttcagagaccaggac
aaggtcgtgcttcttgggcacgatgatgggtacttgcgggacaagaacatgaaggttact
cttgtctacaaccattttggacctaattgcaaccaacggatgccaaggatccgccatgga
tatgcacatgtggtgaacaacttttaccagggatggatgcagtacgccattgggggaagc
acgaatccgagcgtcaagagtcaagccaacctttttattgcaccaaaagctgggaacaag
gaggtgacgtggagaaatggctgcgggcagggggaaaacgcaggatcctgcaaattctac
tcagtggcggatgcttttgaaaatggagcttctttcgatcaatcgcgtggtggcggggca
cgcccgctctataaccgagaacaagttttcccagtcgcagattccagatctgtgaggtct
ttgacaaaatcatctggtgctttgcgatgtacccgacgctctagatgctga
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