Carya illinoinensis (pecan): 122280476
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Entry
122280476 CDS
T08745
Name
(RefSeq) oligouridylate-binding protein 1B isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122280476
03041 Spliceosome [BR:
cill03041
]
122280476
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122280476
Spliceosome [BR:
cill03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122280476
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_PARP14_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
122280476
NCBI-ProteinID:
XP_042947314
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Position
1:complement(49019517..49027102)
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AA seq
423 aa
AA seq
DB search
MQQQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSSCRSVYVGN
IHTQVTEPLLQEVFASTGPVENCKLIRKEKSSYGFIHYFDRRSAALAILHLNGRHLFGQP
IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSR
GFGFVSFRSQQDAQSAINDLTGKWLGSRQIRCNWATKGAASNEDKQSSDAKSVVELTNGS
SEDGKETTNNDAPENNPQYTTVYVGNLAPEVTQLDLHRHFHALGAGVIEEVRVQRDKGFG
FVRYSNHAEAALAIQIGNTPSYLCGKQIKCSWGSKPTPSGTTSNPLPPPAAAPLPGLSAT
DLLAYERQLAMSKMGGVHALMHPQGQHPLKQAAMGMGTAGASQAIYDGGFQNIAAAQQLM
YYQ
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaacagaggctgaagcagcagcagcagcaggctctgatgcagcaagctcttctt
cagcaacaatctctctaccaccctggcctcttagctcctcctcagattgagccaattcca
agtggaaatcttcctcctggttttgatccaagttcttgccgcagtgtatatgtgggaaac
atccatacccaagtaacagaaccacttctccaagaagtttttgcaagtaccggtcccgtg
gaaaactgcaagcttattagaaaggaaaagtcatcctatgggtttatccactactttgat
cgcagatcagctgctcttgctatactgcatctgaacgggaggcatttatttggccagcct
atcaaagttaattgggcgtatgctagtggccagagggaggacacatcaggtcacttcaac
atatttgtgggtgatctcagccctgaggttacagatgctacgttgtttgcctgcttctct
gtttatcctagttgttcagatgcaagggttatgtgggaccagaagactgggcggtcaaga
gggtttggatttgtttctttccggagccaacaggatgcacaaagtgcaataaatgactta
actggtaagtggcttggtagtagacagatacgctgtaattgggcaacaaaaggggctgca
tccaatgaagacaagcagagctcagatgccaaaagtgtggtagaactaacaaatggctca
tcagaagatggcaaagagacaacaaataatgacgctccagagaataaccctcagtatacc
actgtttatgtgggcaatcttgctccagaggtcactcaacttgatctccatcgccacttc
catgctcttggtgctggtgtaattgaggaggtccgggtccagcgagataaaggcttcggt
tttgtgagatacagtaatcatgctgaggctgcactggctattcagattggaaataccccg
tcatatctttgtggtaaacaaattaagtgctcttggggtagcaaaccaacaccatctgga
acaacttcaaacccactccccccgcctgcagctgcacctttacctggcctttctgccact
gatcttttggcctacgagcgacaactagccatgagcaagatgggtggtgttcatgcactc
atgcaccctcaggggcagcatcctcttaagcaggcagcaatgggaatgggtacggctgga
gcaagccaagctatatatgatggtgggttccagaacattgctgccgcccagcagctcatg
tattaccagtaa
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