Carya illinoinensis (pecan): 122280555
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Entry
122280555 CDS
T08745
Name
(RefSeq) (-)-germacrene D synthase-like
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
122280555
Enzymes [BR:
cill01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
122280555
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GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
ArAE_1_C
ANTAR
Motif
Other DBs
NCBI-GeneID:
122280555
NCBI-ProteinID:
XP_042947443
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All DBs
Position
11:complement(42167164..42170112)
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AA seq
560 aa
AA seq
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MSVQVSEVAAPTAQNHVMPEINRRSADFQPSIWGDHFLSYASEFLEYDVNMGQQIEELKE
NVMTMLTAPIEKPSQKLILVDAIQRLGVSYHFDNEIQEILQQLQKTHESDDPEYNDDLYS
VALLFRLLRQDGYYVSCDMFNKFKDSKGNFKGSLCNDVKGILSLYEATHLRVKGEDILDE
ALVFTTTHLQSVASQLSGPLATQVTHALKQPIRKGLQRLEARHYFSVYQEDASHDKVLLK
FAKLDFNLLQKVHQKELADIASWWKDLDFSRKLPFIRDRVVECYFWILGVYFEPQYCFAR
SMLTKVISMTSVIDDIYDVYGTMEELDLFTEAIERWDMSAADKLPEYMKMSYQALLNVYT
EMEQNLGEEKSYRVQYAIESMKNQVRAYHHEAKWFHQKYIPTMDEYMPLALVTSAYAMLA
TTSLVGMGEIVTKDSFEWLFSDPKMVTASAVVCRLMDDIVSHKFEQKRGHVASAVECYMT
QHGVTEEEAVHELMKQVTDAWKDINKECLHPTEVPMPILMRVLNLARVIDVVYKDEDGYT
HAGIVLKDFVASLMVDPVPL
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttcaagtttcagaagttgctgctccaacagctcagaatcatgttatgccagaa
attaaccgtcgttcagcagattttcaacccagcatttggggtgaccacttcctctcatat
gcttctgaattcctggaatatgatgtgaatatggggcaacaaattgaggaattgaaggaa
aatgtgatgacgatgctcacggctccgattgagaagccttcacaaaaactaatcttggtt
gatgcaattcagcgcttaggcgtgtcttaccattttgacaatgagattcaagaaattcta
caacaattgcagaagactcatgaaagtgatgaccctgaatataatgatgacctctacagt
gttgccctgctatttcgactgcttagacaagacggctattatgtttcatgcgatatgttc
aacaagttcaaggacagcaaagggaattttaagggatcactttgcaatgatgtgaaagga
attttaagcttatatgaagccacacatctcagggtaaaaggtgaagatatattggatgag
gctcttgtcttcactaccacacatcttcaatctgtagcatcccaattaagcgggcctcta
gcaacacaagtaacccatgccttgaaacagccaatccggaaaggactacaaaggctagag
gcaaggcattacttttctgtataccaagaagatgcttcacatgataaagttcttcttaag
tttgcaaagttggatttcaacctattgcagaaagtgcaccagaaagaacttgctgacatt
gccagttggtggaaagacttggacttttcaagaaagctaccctttatcagagacagggtg
gttgagtgctatttttggatattgggagtgtactttgagccccaatattgctttgctagg
agcatgctaaccaaagtgatatccatgacctctgttattgatgatatctatgatgtgtat
ggtacaatggaagaacttgacctctttactgaagcaatcgagaggtgggatatgagtgct
gcagataaactcccggagtacatgaaaatgagttaccaggcactcctaaacgtttacact
gaaatggagcaaaacctaggtgaagaaaaatcgtatcgagtccagtatgcaatagaatct
atgaagaatcaagttagagcataccaccatgaagccaaatggttccaccagaaatacata
ccaacaatggacgaatatatgccccttgctcttgttacctctgcctacgcaatgttagca
accacatccttagtcggaatgggagaaattgtcacaaaggattccttcgaatggttgttc
agtgaccctaaaatggtcacagcttcagcagtggtttgccgactcatggatgacatcgtg
tcacacaagtttgagcaaaaaagaggacacgttgcttcagctgttgaatgctacatgaca
caacacggtgttacagaagaagaagcagtccatgaattgatgaaacaagtgacagatgca
tggaaggatataaacaaagagtgcctccacccaactgaagtccccatgccaattctcatg
cgagttctcaaccttgcacgtgtcattgatgtcgtgtacaaagacgaagatggctacaca
catgctggaattgtgctcaaagattttgtagcgtctttaatggtggatcctgtgccctta
taa
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