KEGG   Carya illinoinensis (pecan): 122280600
Entry
122280600         CDS       T08745                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122280600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cill03019]
    122280600
   03041 Spliceosome [BR:cill03041]
    122280600
Messenger RNA biogenesis [BR:cill03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     122280600
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     122280600
Spliceosome [BR:cill03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    122280600
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 BRAP2
Other DBs
NCBI-GeneID: 122280600
NCBI-ProteinID: XP_042947499
LinkDB
Position
11:complement(44789393..44793297)
AA seq 347 aa
MASKSRGDNPHSGNGASPGKIFIGGLHKETSFGMFRNHFEKYGEITDAVIMRDRYTNQPR
GFGFVTYADPSVVDKVIEDTHIINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSSVTE
EEFKNFFSKYGEVVEHQIIRDHETQRSRGFGFIIFDSDEVVDEILSNGNMIEMAGTQVEI
KKAEPKKSSNPPPAPAYGSNSRSRSFNDGYSGFGGSYGGFDGGFGPGPYRTAGLGSRLGG
GYGYGGGSGEFGGGYGGFGSSSLGGYRSESSLGYSSRFGPYGGGFGGSYGSGLGGYGQGG
EGYGGYGSSGYGAGYDSGPGSSYSGAGGLYGRGGGYSGSSRYHPYGR
NT seq 1044 nt   +upstreamnt  +downstreamnt
atggcgtcgaaatccaggggcgataacccacactcaggcaatggtgctagtcctggaaag
attttcatcggaggattgcacaaagaaacgagctttgggatgtttaggaaccactttgag
aaatatggagagataacagatgctgtaataatgagagatcggtacactaatcagcccagg
ggttttgggtttgtcacctatgctgatccttcagtggttgacaaggttattgaagacacc
catatcatcaatggaaaacaggttgagattaagaggaccattccgaaaggccaagggcag
tcaaaagatttcaaaacaaagaagatatttgttggtggtattccatcatcagtcactgaa
gaggagttcaagaatttcttctccaagtatggggaagtggtggaacaccagatcatacgt
gatcatgaaacccagcgatctcgaggctttggattcataatttttgacagtgatgaagtt
gtagatgaaatattatcgaatggaaatatgattgaaatggcgggtacccaggtggagatc
aagaaagctgaaccaaagaaatcctcaaacccaccacctgctcctgcatatggtagcaac
tctaggtctcgttcttttaatgatggctacagtggttttggcggttcttatggaggtttc
gatggagggtttggtcctggtccctacaggacagcaggtcttggcagtagacttggtggt
ggatatggctatggtggtggtagtggtgaatttgggggtggttatgggggttttggatcc
agtagcttaggtggctaccgaagtgagtcttcccttggttattctagtcgctttggaccc
tatggtggtggttttgggggcagttatggaagtgggttaggtggatatggccaagggggt
gaaggctacggaggttacggaagttcaggctatggtgctggttatgactctgggcctggt
tctagttacagtggagcaggtgggctgtatggaagggggggaggctacagtggcagtagc
cggtaccacccctatggaaggtag

DBGET integrated database retrieval system