Carya illinoinensis (pecan): 122280739
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Entry
122280739 CDS
T08745
Name
(RefSeq) truncated transcription factor CAULIFLOWER A-like isoform X1
KO
K09264
MADS-box transcription factor, plant
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122280739
Transcription factors [BR:
cill03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
122280739
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GFIT
Motif
Pfam:
K-box
SRF-TF
FliD_C
DUF2071
DUF3440
Motif
Other DBs
NCBI-GeneID:
122280739
NCBI-ProteinID:
XP_042947680
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Position
11:11087435..11095154
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AA seq
248 aa
AA seq
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MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTD
SCMERILERYERYSYAEKQLDAGDLEQNGSWTLEHAKLKARMEVLVKNQKHYMGEDLDTL
GLRELQNLEQQLDSALKHIRSRKNQLMHESISELQKKDKALQEQNNLLAKKVKEKEKEVL
AQQTQWEEQNHALDHLVSLPPQPLHSLNIGGSYQAFRGSGRDDEGTPSDQHRANAVLLPP
WMLRHLEQ
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggggaggggaagggttcagttgaagaggattgaaaacaagatcaacaggcaggtcact
ttctcaaagagaaggtccgggttgctgaagaaagcacatgagatctctgtgctttgtgat
gctgaggttgctctaattgttttctctaccaaagggaagctctttgagtattctacggat
tcttgtatggaaaggatccttgaacggtatgagagatattcatatgcagagaagcagctt
gatgcaggtgatcttgaacaaaatggaagctggacactggaacatgcaaagctcaaggct
cggatggaggttttagtaaaaaatcaaaagcattacatgggagaagatctggataccttg
ggtctcagagagcttcaaaatttggagcaacagcttgattctgctctcaaacacattagg
tcaagaaagaatcaacttatgcacgaatccatttcagagcttcagaaaaaggataaggca
ttgcaggagcaaaataacttgcttgcaaagaaggtgaaggagaaagaaaaggaagtgcta
gcccaacagacacaatgggaggagcaaaatcatgcccttgatcacttagtctctcttcca
ccacagccattgcattccttgaacattggcggatcttaccaagcatttagaggaagtgga
agagatgacgaaggaactccatcggaccaacatcgagcaaatgcagtgctcctgccccct
tggatgcttcgccatcttgaacaatag
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