Carya illinoinensis (pecan): 122280819
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Entry
122280819 CDS
T08745
Name
(RefSeq) transcription initiation factor TFIID subunit 12b isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122280819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122280819
03036 Chromosome and associated proteins [BR:
cill03036
]
122280819
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122280819
Coactivators
SAGA/TFTC/STAGA complex
122280819
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
122280819
STAGA complex
122280819
TFTC complex
122280819
SAGA complex
122280819
SLIK complex
122280819
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
122280819
NCBI-ProteinID:
XP_042947798
LinkDB
All DBs
Position
1
Genome browser
AA seq
637 aa
AA seq
DB search
MAESAAAAASSPKPLQHANPIDPTTATPPAPTTIATQAPTPTPTNTGIAQNPSNSSSNPP
PIPSPSPLSHSHSPSLDHISSPPQIPLPQPQPQQHQQLTPAVGLDYQHLKLQQQPQQQQS
QQQQSQQPQSLTQNVPGMSNYQIQQSMQRSSSMSRLNQIQQLGVMRQQQQQQGLYGNVNF
GGSGGIQQQNQQQLGTGGNLSRSTLIGQSGHLPMLSGAAAAAAAAQFNMQPQLLASPRQK
AGLVQGTQFHQVNPAGQALQGMQAMGMMGPLNLSSQIRANGATNYAQRINPGQMRQQLQH
QSSLNSAQIQSLPRTSSLAFMNSQLPGLSQNGQPAMLQNSLSQQQWLKSMPPISGTGSTS
HRLHQRQQQVLFQQQLQQTSLGLNQQQLSQLVQQQQPMGHSQLHQQQQQQQQQQQQLQPP
VQQQLQQLPLHQQQQYSPRVPGHTGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQL
LGKRKIQDLVSQVDSQGKLDPEVQDLLLEIADDFIDSVTTFACSLAKHRKSSTLESKDLL
LHLEKNWHLNIPGYSGEERKYPSKPLSTDLHKKRLDVIRTLMESPHPETNTSNDKEMIRQ
GLTNPVGASYLVRPSISPEQLVSQSTGPQMLQQMTRF
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaagtgcggcagcagcagcatcgtctccaaagcccctccaacacgcaaacccc
atcgacccaacaactgcgacaccaccagcaccaacgacaattgcaacacaagcgcctacg
cccacgcccacaaataccggaattgctcaaaatccatcaaattcttcatcgaatccacca
ccaatcccttcaccttctcccctttcacactcccactccccttcccttgaccatatctcc
tcccctccacaaatccctctcccccaaccacaaccgcaacaacatcagcagctcacccca
gccgttggattagattaccaacatctaaagctgcaacaacaaccgcagcagcaacaatcc
caacagcagcaatctcagcaaccgcagagtttgacccagaatgtccccggaatgtcgaat
tatcaaatccagcaaagcatgcaacgctcatcgtccatgtcgcggttgaatcagattcag
cagcttggggttatgaggcagcaacagcaacagcaggggctttatgggaatgtgaatttt
ggtgggtctggtgggattcagcagcaaaatcagcagcaattgggtactggtgggaacttg
tcccgttcaacgctgatcgggcagagcggccacctgcccatgttgtcaggcgcagccgcc
gccgcggctgctgcgcagttcaatatgcaaccccagttgctagcatcgccaaggcagaaa
gctggactggtccaagggactcaatttcatcaagttaacccagctggtcaagctttacaa
ggaatgcaagcaatgggaatgatggggccacttaatttgagctcacaaataagagcgaat
ggggccaccaattatgcccagcgaattaacccgggtcagatgaggcaacagttgcagcat
caaagttctctcaactctgcacagattcaaagcttacccaggacgtcatcgctggcattt
atgaactctcagttacctggcttgtctcagaatggacagccagccatgctacaaaactct
ttatcacagcaacagtggttgaaatcaatgccaccaatctctggcactggttcaacttca
caccgtcttcatcagaggcagcagcaggtcctctttcagcagcagttgcagcaaacctct
ttgggcttgaatcaacagcaactatcccagctggtacagcagcagcaaccaatggggcat
tcacaactacatcagcagcagcagcagcagcaacaacaacaacagcaactacaaccacct
gtacaacaacaattgcaacaactgcctctgcatcagcagcagcagtattctcctagggtc
cctggacacacaggccagaaatcacttagtttgacaggatcacaaccagatgctactgca
tctggtacaacaacaccaggggggagttctagccaaggaacagaagcgaccaatcaactt
cttgggaaaagaaaaatacaggatttggtttcacaggtggattcacagggaaagctggat
cctgaagttcaagatcttcttttagagattgccgacgacttcattgattctgtgactaca
tttgcatgcagtttggcaaaacatcggaaatcatcaactttagagtccaaggatttatta
ctacacctagagaagaattggcatttgaacataccaggatattcaggtgaagagcggaag
tacccaagcaaacctctgtcaactgatctccacaagaagcgtcttgatgttatacgcaca
ttaatggaatcccctcaccctgaaacaaatacaagtaatgataaagagatgataagacag
ggactgactaatccagttggtgccagctacttggtacgaccttccattagtccagagcag
ttggtttcccaatctactggtccccaaatgctacagcagatgacacggttttaa
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