Carya illinoinensis (pecan): 122280821
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Entry
122280821 CDS
T08745
Name
(RefSeq) uncharacterized protein LOC122280821 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cill03016
]
122280821
03036 Chromosome and associated proteins [BR:
cill03036
]
122280821
Enzymes [BR:
cill01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
122280821
Transfer RNA biogenesis [BR:
cill03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
122280821
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122280821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
DUF4780
Motif
Other DBs
NCBI-GeneID:
122280821
NCBI-ProteinID:
XP_042947795
LinkDB
All DBs
Position
11:20649996..20727740
Genome browser
AA seq
1854 aa
AA seq
DB search
MRNRPQTLEEVVLDMSTSRSGSMNSLMASLSTSFGKVPPVAVPAMLDCILASTSLPPSSL
FASLLDAFPNLIKDIIEEDGKLGRDRCNYLTSLVGALCHLLKKLGANNNALQSFMSISFI
PLLKLVDASDRELLNQIGELFINVVIETNSWVVVEENLVPLFVRFVGLSAGMLQHKESDA
FECAVFKGLNELRNVVGGVKEHILSPSGPFPLPISCHILTLMLDASLQSLQSASISELIV
ANDYYAEKFAANLIWDLCNLTERLLLQSLEHRSCTIHFFLPIIFKAFVSYRSFEISVHGQ
KQILLRKSFLEEIWKCCRTLFSLGTLERRDAYNVLSMYFSSLPCTEQCDVADTSVSEEEF
DIRSEKEFWDEIKRGLVDKEGLVRKQSLQMLKNVLPINGGSQPSSVVSDTKLCERSIPRG
MTKRELWADKEAKSMGIGKINKSADQNLNSHQQWEAFILLYEMLEEYGTHLVEAAWNHQV
SLLLQFSMSHVNFASLVDGIHRNQSEIMGEIFNWLSILWERGFCHDNPQVRCLIMQSFLG
IEWKNYGNSAKSVPETFVLGPFIQALNDPVHHKEFGVKGVYSSRIIEGAAQFLHQYTSCL
NERNRIAFLSKLASAAKQQSFSRAGLMGLAECIALAACRNDSEADWCEDAFLDMANVETS
SENFLQHDKATLLDILRFVIESSRQHFNPNYRFRVCDKVLEAAVSVVCVFEVPLEILLHF
ISTLPRELTDYGGSLRVKVQEWLLGCGKKHCSSRCYNTEVKLLKSLHEFPKKFTSCHCVV
NDFLIYDDEDLDAWEFEIKRWARVLFLAIKEEHHLMPILKFIQNYGANICNQSNDMEWIP
VKFLILSLSLVHELQIMHERAAEYGIEVQRRSEFSSPKTPFLLNYGEVAILFEKFAEIFL
LILEELVSFANLSCSIYSSSTAIDDIDLPSSVRGKLGGPSQRRLSSSTTTAVLQAVTAVK
SVAAISSWCAKFKSDVLLNFSSSFLWKFFLKTVSFPSCDSETGAEICVAGYEALAPALRA
LASVFSPQVLDAIRENDNFLLPKLEGTLLLDSLALSFLQNINNLLAVGVLARTRRAVLLN
WKWLCLESLLSIPSYADVNGLHLEEVNCVYSEAALRLIFTDLVESLENAGEDSVLSMLRS
VRLALGLFAKGTLHSVVSSCNGVDVQMMWHLVRSSWILHVSCNKRRVAPIAALLSSVLHS
SVFGDENMHVTNKAPGPLKWLIENIIEEGKKSPRTIRLAALHLTGLWLSNPRTIKYYIKE
LKLLSLYGSVAFDEDFEAELQDNFDAKTEVSLLAKSADPELTEVFINTELYGRVSVAALF
YKLVDLADMVGSTNETEDCLAALESGKLFLLELLDSVVNDKDLAKELYKKYSAIHRRKIR
AWQMICVLSRFTCEDIVGQVIQSLHTSLCRNNLPAVRQYLETFAINIYLKFPSLVVEQLV
PVLRDYDMRPQALSSYVFIAANVILHASEAFKFMHLDNLLPPIIPLLTSHHHSLRGFTQL
LVYQVLCKLFPTLDSGDSQIIALEKRCFEDLKSYLAKNSDCVRLRASMEGYLDAYNPESS
VTPGGIFVNRVEELEFECVPVSLMEQVLTFLNDVREDLRCSMARDVVIIKNESLRVDEDL
DRMEISSNVQEQKLLSQQPCLDFQKKITLLKHEKKDDDVISFFGNKETNEQIFEMEKDDL
LLDQLLQSRSLAMERIRASRQPFILVASLLDRIPNLAGLARTCEVFKASGLAIADASILR
DKQFQLISVTAEKWVPIIEVPVNSVKVFLEKKKQEGFSILGLEQTANSIPLDQYTFPAKT
VLVLGREKEGIPVDMIHVLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRSK
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaccgcccacaaacgctagaggaagtagttttggatatgtctacgagtaggagc
ggctccatgaactctcttatggcttcactctcaacgagtttcgggaaagtgcctccggtg
gctgtcccagcgatgttggattgcatattggcttccactagcttacctccatcgtctctc
ttcgcttctcttcttgacgctttccctaatctcattaaggatattatcgaggaggatggg
aagttgggtcgtgatcggtgtaactatcttacatcattggtgggtgcactttgtcacctt
ctaaaaaaacttggggccaataataatgctttgcaatcatttatgtcaataagttttatt
cctttgttgaagctggtggatgcatctgaccgtgaactgcttaaccagattggcgaattg
ttcatcaatgttgtgatagagactaattcctgggttgttgtggaagaaaacttggtgcca
ttgtttgttagatttgttggtctttctgcgggtatgcttcaacacaaagagtcagatgcc
ttcgaatgtgcagttttcaaaggtttaaatgaactgagaaatgttgtgggtggggtaaaa
gaacacattctttctccatctggacccttcccactaccaatatcgtgtcatattctaacc
ttaatgctggatgcttcccttcaaagcttgcaatcagcttcaatctcagaattgattgtg
gcaaatgattattatgcagagaagtttgctgctaatttaatttgggatctttgtaatttg
actgaacgactgcttctacaaagtttggaacaccggtcctgcacgattcacttttttctc
ccaattattttcaaagcatttgtttcatatcggtcttttgaaatctcagttcatgggcag
aaacaaatacttttgaggaagagtttccttgaagaaatctggaagtgctgcagaacactg
ttttctcttggaactttagagagaagagatgcctataatgtactctccatgtatttctct
tctcttccttgtacagaacaatgtgatgttgctgacacaagtgtgagcgaggaagaattc
gacataagatctgaaaaagaattttgggacgaaattaaaagaggattggttgataaagag
ggactggtgaggaagcagtcgttacaaatgttgaagaatgtacttcccattaatggagga
agccaaccctcttctgttgtttcagacacgaaattgtgtgaaaggtcaatccctcgtggt
atgacaaagagggagctgtgggctgacaaggaagccaagtcaatgggtattggaaaaatc
aacaaatcagctgatcaaaatttgaacagccaccagcagtgggaggcatttatactatta
tatgagatgcttgaagagtatggtactcacttagttgaagcggcatggaatcatcaggta
tcgttgttgcttcaattctctatgtcccatgttaattttgcaagccttgtggatggaatc
catcgaaaccagagtgaaatcatgggtgaaatttttaattggttatcaattctttgggaa
cgaggcttctgtcacgataatcctcaagttaggtgcttgattatgcagtcatttctggga
atagagtggaagaattatggaaactctgcaaaatctgtgcctgaaacttttgttcttggt
ccattcatacaagcgttgaatgaccctgtgcaccacaaagagtttggtgtaaaaggagtc
tactcatccaggataattgagggtgcagcccagtttttacaccaatacacaagttgcctc
aacgagaggaaccgaattgcatttttgagcaagctagcatcagctgctaagcagcaatct
ttcagtagagctggattgatgggtcttgcagaatgcattgccttagctgcttgtagaaat
gacagtgaagcagactggtgtgaagatgcttttcttgacatggctaatgtggaaacttct
tcagaaaattttctacaacatgataaagcaactttacttgatattttgagatttgttata
gagagcagcagacaacatttcaatcctaattatcgttttcgagtttgtgacaaagtcctt
gaggctgctgtttcagtagtatgtgtgtttgaagtgcccctggagatacttttgcacttc
atttcaacattgccacgagaattaactgactatggtggttccttaagagtaaaggtacaa
gaatggcttttaggttgtggtaagaagcattgtagttcaagatgctacaatactgaggtg
aagcttttgaagagtcttcatgagttccccaaaaagttcacaagttgtcattgtgtggtc
aatgattttcttatatatgatgatgaagacttggatgcatgggaatttgaaataaaacga
tgggcaagagtgcttttccttgcaatcaaggaggaacatcatttaatgcctatattaaag
tttattcaaaattatggtgcaaatatttgcaatcaaagcaatgatatggaatggatacct
gtgaagtttctcattctttccctgagtttggttcatgagcttcaaataatgcatgaaaga
gctgctgaatatggtatcgaagttcaaagaagatcagaatttagctcacctaagacaccg
tttctattgaattatggagaagtagccattttatttgagaagttcgctgagatttttctt
cttatactggaggaactagtctcatttgcaaacctatcttgttccatatattcgtccagc
acagcgatagatgatatcgatctgcctagttctgtgagaggaaaacttggaggccctagt
caacgccggttgtcatcttccaccaccactgctgtgctgcaagctgtaacagctgtgaag
tctgttgcagctatctcatcatggtgtgcaaaatttaaaagtgatgttctgctaaatttt
tcttctagctttttgtggaagttcttcttgaagactgtttcatttccatcttgtgattca
gagactggagcagaaatctgtgttgcaggatatgaagcattggctcctgctctcagagca
ctagcgtctgtgttttctcctcaagttttggatgctattagggaaaatgataatttcctt
ctacctaaacttgaaggcacacttctattagattccttggccctttcttttcttcaaaac
atcaataatcttcttgcagttggggttttggcaaggacacgccgagcagttctactgaat
tggaagtggctgtgtctggaatctcttttgtcaattccaagctatgctgatgtgaatggg
cttcatttagaggaagttaactgtgtttactcagaagctgctctcagattgatcttcact
gaccttgtcgagagccttgagaatgctggggaagactctgttttatccatgctgagatca
gtcagattggctttggggctttttgctaaaggaactttgcattcagttgtttcctcgtgc
aatggtgtggatgtccagatgatgtggcatttggttcgttcctcttggatattgcatgtc
agctgcaacaagcggagggttgcacctattgccgctcttctctcctctgttttgcattca
tccgtgtttggtgatgagaacatgcatgtaactaacaaagcgcctgggcctctgaagtgg
ttaattgaaaatattatagaggaaggcaaaaaaagtcctcgtacaattcgtcttgcagca
ttacacttgacagggctttggctctcaaatcccaggaccattaagtactacattaaagag
ctcaaactactctctctttatggttctgttgcttttgatgaggattttgaagctgaattg
caagacaactttgatgcaaagactgaagtgtcattattggcaaaaagtgctgatcctgag
ctgactgaagtatttatcaacacagaattgtatggacgtgtttctgttgctgctttgttt
tacaagctagttgacttggctgatatggtgggatcaacaaatgaaactgaagattgtctt
gctgctttggagtctggaaagttatttctgttagaactgcttgattctgtggtaaatgac
aaggaccttgcaaaggagttgtataaaaagtacagtgcgatccacaggcgcaaaatacgt
gcttggcagatgatatgtgtcttatcacgattcacttgtgaagacatagtgggacaagtt
atacaaagcttgcacacatccctttgtagaaacaacttgcctgctgttcgccaatactta
gagacatttgcaatcaatatttacttgaagtttccatcactggttgtggagcaattagtt
cctgtattacgagattatgacatgaggcctcaggcactctcatcgtatgtatttatagca
gctaatgtcatcctccatgcgtctgaagcatttaaattcatgcatttggataacctactt
ccacctataattccattgttgacgtcacatcaccacagcttacgtggttttacgcagcta
ctagtataccaagttctttgcaaactatttcctacattggattctggagactctcagatc
atagctttagagaaaagatgctttgaagatttgaaatcataccttgcaaagaattctgat
tgcgtgcgcttacgagcatcaatggaaggatatcttgatgcctataatcccgaaagctct
gtcactccaggaggaatttttgtcaatcgggttgaggaactcgagtttgaatgcgtacca
gtatcccttatggagcaagtgcttacctttttaaatgatgtcagagaagaccttagatgt
tcaatggccagggatgtggtaatcatcaagaatgagagcttgagagttgatgaagatctt
gaccgcatggaaatatcatctaatgtccaagaacaaaagctgcttagccagcagccttgt
ttagattttcaaaagaagattactctcttgaaacatgagaagaaagacgatgacgtcatt
tccttctttggcaacaaggaaacaaacgaacaaattttcgaaatggaaaaggatgacctg
cttctagatcagttgttgcagtctagaagtctagctatggaaagaataagagctagtcgg
caaccttttatcttagtagcatcactgcttgatcgtatacctaaccttgctgggttggca
cggacatgtgaggtatttaaggcatcaggattggccattgcagatgcatccatattacgt
gataaacagttccagcttatcagtgtgacagcagagaagtgggttcctatcatagaagtt
cctgtgaatagtgtgaaggtcttcttggagaaaaagaaacaagaagggttctctatactg
ggattagagcaaacagcaaatagtatacctcttgaccagtatacctttcctgcaaagacg
gtcctcgtcctcggccgtgaaaaggagggtatacctgttgatatgatacacgttttggat
gcttgcattgagattccacaactgggggttgttagatctctcaatgttcatgtcagtggt
gccattgctctctgggagtatactcgacagcaaagatccaaatag
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